Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3122 ATGGTGTCCCCGGAAAACTCCAATTGGTTTTTCGATTATGGTCTGATTGACGACATATCCGTTCCTGATGGCAGCTTCACTGTCCCTGCTTCCGGGTTCACCTGGCCAGCGCAGGCCCTAAACGGTTCCTCGAATGTCAGCGTGGAAATCGATGGCTCATTGGAGGATTCTGATGGCCTCAAAGAATCTGGCTCGAAGAAGAGGGGTAGAAGTGATTCATGTGCTGCTTCCAGCTCCAAGGCATGTCGGGAGAAGTTGCGAAGGGATAGGCTAAATGACAAGTTTCTTGAACTAGGCTCCATTTTGGAGCCTGGAAGGCCTCCCAGAACAGACAAGGCTGCTATTTTGATTGATGCTGTCCGAATGGTGACACAATTACGGGGTGAGGCCCAGAAGTTGAAAGAATCAAATACGAGTCTTCAAGAGAAGATAAAAGAGTTAAAGGCTGAGAAGAATGAACTTCGTGATGAGAAACAGAGGCTCAAGGGAGAGAAAGAAAAGTTGGAGCACCAGCTGAAATCTATCAATGTACAGCCCAGTTTCATGCCTCCCCCGCCTGCAATTCCTGCTGCATATGCTACTGCACAAGGCCAAGCCCCAGTCAACAAGATGGTTCCGTTTATTAGTTATCCAGGAGTTGCCATGTGGCAATTTATGCCACCAGCTGCAGTGGATACCTCACAGGATCATGTACTCCGTCCCCCAGTTGCCTAA 714 0.4888 MVSPENSNWFFDYGLIDDISVPDGSFTVPASGFTWPAQALNGSSNVSVEIDGSLEDSDGLKESGSKKRGRSDSCAASSSKACREKLRRDRLNDKFLELGSILEPGRPPRTDKAAILIDAVRMVTQLRGEAQKLKESNTSLQEKIKELKAEKNELRDEKQRLKGEKEKLEHQLKSINVQPSFMPPPPAIPAAYATAQGQAPVNKMVPFISYPGVAMWQFMPPAAVDTSQDHVLRPPVA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3122 237 Gene3D - 78 155 IPR036638 GO:0046983
Bisa02g3122 237 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 146 IPR036638 GO:0046983
Bisa02g3122 237 PANTHER BHLH TRANSCRIPTION FACTOR 4 237 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Bisa02g3122 237 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Bisa02g3122 237 MobiDBLite consensus disorder prediction 54 69 - -
Bisa02g3122 237 CDD bHLH_AtILR3_like 80 155 - -
Bisa02g3122 237 FunFam Transcription factor bHLH34 66 124 - -
Bisa02g3122 237 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Bisa02g3122 237 Coils Coil 123 178 - -
Bisa02g3122 237 SMART finulus 81 132 IPR011598 GO:0046983
Bisa02g3122 237 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3122 Bisa-ChrBisa02 79077586 79079815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3122 1 237 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 73.640 4.23e-122 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g3122 HLH 2e-09 No_clan