Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3093 ATGAGCAGCAACTTCACCAATTTCGCGCTTTCTCCAGGGGGTCGGGGAACCAGGGACAGAGCCTATGATCACCATACTCCCTACAACAGTGACTTCTATGAGGTGCCTGTGTTCTACCAATCTCAGTTTGGTCATGCCTCTCCGTATTACCAGGATGAGTGGACATCTAATGCACTGAATTCCCAGCGATATCTAGAAGAAAGAACGGATCCAGCATTCTACGGCATACCAGATTTTCCAGTACAGCCACATCGAATTTTCATTCTTGATGGAGACACCGCAAGGGGATTCAACCCCAGGCTCAGAGAAACTCACCAGCAATCTGTTCCAACTTCAAGATCCACGCGCCAAGCAAACGCGCAAGCTCCAACGGCACAGGAGAATTCCAGATCCAGAGCCCTGAGCAAGCTCAAGAAAGAAATCTACGACCCCAATCCAAATCCAACCCCGAAGTTGCTGGCGAACAGTGTGTGCTTGTACTACAGAGACACCAACGCTGTGGATGCTCTGAAGGAGATGGAGATGAAGGAAAAAGGTGAAGATGGGAAAAGGTGTGCGGTGTGCTTGGAGGATTTTGAGCCCAAAGAGGAGGTGATGGTGACTCCTTGCAGGCACATGTTTCACGAGGATTGCATAGTGCCATGGGTGGGAAGCCAAGGTCAGTGTCCGATCTGTAGGTCTGTGATCTGCGAGAGGGTGAGGGAGAACTCACCTTCATCGTCCTTCAACTTCAACAGCTATGATATTGGCAGTGTGGCGCCCAGTGACATAATTGCAGGGCAGCTTTTGTCTATTTTGAGGGCCATGGAAGAAGCTTTTGAGTTGCGCAGTGAAAATCACTGA 843 0.4982 MSSNFTNFALSPGGRGTRDRAYDHHTPYNSDFYEVPVFYQSQFGHASPYYQDEWTSNALNSQRYLEERTDPAFYGIPDFPVQPHRIFILDGDTARGFNPRLRETHQQSVPTSRSTRQANAQAPTAQENSRSRALSKLKKEIYDPNPNPTPKLLANSVCLYYRDTNAVDALKEMEMKEKGEDGKRCAVCLEDFEPKEEVMVTPCRHMFHEDCIVPWVGSQGQCPICRSVICERVRENSPSSSFNFNSYDIGSVAPSDIIAGQLLSILRAMEEAFELRSENH 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3093 280 MobiDBLite consensus disorder prediction 102 131 - -
Bisa02g3093 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 162 236 IPR013083 -
Bisa02g3093 280 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g3093 280 SMART ring_2 185 225 IPR001841 -
Bisa02g3093 280 MobiDBLite consensus disorder prediction 102 133 - -
Bisa02g3093 280 Pfam Ring finger domain 184 226 IPR001841 -
Bisa02g3093 280 ProSiteProfiles Zinc finger RING-type profile. 185 226 IPR001841 -
Bisa02g3093 280 SUPERFAMILY RING/U-box 176 233 - -
Bisa02g3093 280 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 85 227 - -
Bisa02g3093 280 FunFam RING/U-box superfamily protein 169 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3093 Bisa-ChrBisa02 78244503 78246430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3093 101 273 C3H Transcription Factor Family AT3G58720 41.899 6.91e-41 140