Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3092 ATGGTACAATTACGGAACCTCAGTCCTCAGCGTGTCCGAGTACGCGTCAGAGTCAGAGCTGGAACGTGCAGGGCGCGTGGTCAATCCCGCCAGCTGGCATCCGGGTTGGCTGGCGCAACCTTATCCATTTTCTTTTCTTTTCCTGTGACTGATAATCTCACCCCCAAACCCCCTCACCTCCCTCCCCATTGGCCCACCACTCTACCCTCCCTCTTCTCTATAATGACCACACTGCCACTCTTCCCCCCGCACGTGCCTATACTCCCTTCCATTGGTTGGTCACGCATGCGCCTCAACCTCTCTAGGTCTCCCACTTGGGTGCATGTGTTTGTGAGCGTGGTTTTGGTTGCAAGAAAGGTATCTGTATTATCATTGAGCGCTTTTCTGGCCGTACAATTGTCGTTGATCTTGTTTTCTTGGAAATGTCTGGACTGGAGTTTTCTTGGTAGAATGTTTATGGGAGAACAAGTTTTGTGGGATTTCATATCAGAGAACGAAGTAAAGATGATGTCAAAATCGTATACAAATCTCTTAGATTTGGCTTCAGGGAATTTCCCAGCAATGGGTAGGGAATCTAAAGATCGGAGGCGGCTCCCAAGGGTTATGAGTGTCCCTGGGGCTATCTCAGAAATTGATGATGATCAGGCATACAGTGTTTCTTCTGATAATCCATCAGCTACTTCTAATGATCGGATTATCATTGTTGCAAATCAGCTTCCATTGAAAGGAAAGCGAACAGAGGACAACCAAGGATGGAGTTTCAGTTGGAATGAGGATGCATTACTTTTACAACTTAAGGATGGTTTTCCAGAAGAGATGGAGGTTCTTTACATTGGGTCATTACGAGTTGAAGTTGATCCTGCTGAGCAGGACAAAGTATCACAGCACTTGTTAGAAAAATTCAACTGCCTTCCTACTTTTCTGCCGTCTAATATTTTGGAAAAATTTTATGATGGTTTTTGCAAAAGGCACTTATGGCCACTGTTTCATTACATGTTACCGTTTTCAACTGATAAAAGTCAGCGTTTTGACCGCAATTTGTGGGAAGCCTATGTGTTAGCAAATAAGCTTTTCTTTCAAAAGGTAGTTGAAGTAATAAACCCAGAGGATGATTATATTTGGATTCATGATTACCATTTGATGGTTCTGCCAACCTTTATAAGAAGGCGCTTTAACAGGGTAAAAATGGGATTTTTCCTGCATAGTCCCTTTCCTTCGTCAGAGATATATAGGACTCTTCCTGTCAGGGAGGAGATACTAAAAGCTTTACTTAACTCTGATATCATTGGTTTTCACACCTTCGACTATGCTCGTCATTTCCTTTCCTGTTGTGGTCGGATGTTGGGTCTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTATGGAAGGACTATTAGTATAAAAATAATGCCAGTTGGAATTCACATGGGTCGGATTGAATCAGTCATGAAAATGACAGATGAGGAGAATAAGGTTAGGGAACTCAAAGAAGAATATGAAGGAAAAACAGTGTTGCTTGGTATTGATGATATGGACATCTTTAAAGGAATTAATTTAAAGATTTCATCTATGGAGCAGATGCTCAAACAACATCCTGAATGGCAAGGAAGAGCTGTGCTGATACAGATAATAAATCCTCCTAGGGGCAGAGGGATACATTTAGAGGACATCCAAGCTGAAATACAAGAAAGCTGCAGCAGGATCAACAGAGTATTTGGGCGGCCTGGTTATGAACCGATTGTTATTATTGATAGACCAGTTTCAATTACTGAAAAAGTAGCATATTACAGGATTGCTGAGTGTGTTGTTGTTACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGGAATATCTGATTCTGACTCAAGTTCCGATGTCAGTGGGTTGAAGAAGAGTATGCTTGTAATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGTGCTATCCGTGTCAACCCATGGAATGTGGAAACAACTGCAGAGGCTATGAATGAGGCCATCTCAATGAATGATGGAGAGAAACAGTTGCGGCATGAAAAGCATTATCGATATGTTAGCACTCATGATGTGGCTTATTGGTCACGCAGTTTCTTGCAAGATATGGAGAGGGCTTGTACAGACCTTCTGAGGAAAAGATGTTGGGGAATAGGTCTTAGCTTCGGATTTAGAGTTGTAGCACTTGACCCTAATTTTAGAAAGCTCTCACTTGATGATATGGTTTCAGCTTACACGAGGACGAGGAGTAGGGCCATTTTATTGGATTATGATGGTACTGTTATGCCACAGAACTCCATTAATAAGACTCCTAGTCAGAAAGTCATTTCCACTTTGAACACTCTCTGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGAAGGGGGAGGGATAGCTTAGATGAGTGGTTCACTTCCTGCACAAAGCTTGGTATTGCTGCAGAACATGGGTACTTCTTGAGATGGTCTCAAAGCGAAGAATGGAAAATTGGTGGTAAGAGCTCTGACTTTGGCTGGATCCAGATTGCCGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTAGCATTGAAAAAAAGGAAAGTGCTTTGGTCTGGCAATATCGAGATGCGGACCTTGGCTTTGGATCTTCTCAAGCTAAGGAAATGTTAGATCATCTAGAGAGTGTTTTGGCCAATGAACCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTTGAAGTAAAGCCCCAGGATGTGAGCAAGGGGTTAGTTGCAGAAACGATATTTTCAACAATGGCTGAGCAAGGCAATCCGGTTGATTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAACTATTAGTAGTGCAATGTCCAGAAATATTCTTTCTGCCAAATCTTCAGTATTTGCTTGCACGGTTGAACAAAAACCCAGCAAAGCTAAGTATTACCTGGATGATACTACTGAAGTGATAAGCATGCTAGCATCTTTGGCTGATGTTTCAGAGGATAACCCTTGA 3051 0.4218 MVQLRNLSPQRVRVRVRVRAGTCRARGQSRQLASGLAGATLSIFFSFPVTDNLTPKPPHLPPHWPTTLPSLFSIMTTLPLFPPHVPILPSIGWSRMRLNLSRSPTWVHVFVSVVLVARKVSVLSLSAFLAVQLSLILFSWKCLDWSFLGRMFMGEQVLWDFISENEVKMMSKSYTNLLDLASGNFPAMGRESKDRRRLPRVMSVPGAISEIDDDQAYSVSSDNPSATSNDRIIIVANQLPLKGKRTEDNQGWSFSWNEDALLLQLKDGFPEEMEVLYIGSLRVEVDPAEQDKVSQHLLEKFNCLPTFLPSNILEKFYDGFCKRHLWPLFHYMLPFSTDKSQRFDRNLWEAYVLANKLFFQKVVEVINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCGRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIESVMKMTDEENKVRELKEEYEGKTVLLGIDDMDIFKGINLKISSMEQMLKQHPEWQGRAVLIQIINPPRGRGIHLEDIQAEIQESCSRINRVFGRPGYEPIVIIDRPVSITEKVAYYRIAECVVVTAVRDGMNLTPYEYIACRQGISDSDSSSDVSGLKKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMNDGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFRKLSLDDMVSAYTRTRSRAILLDYDGTVMPQNSINKTPSQKVISTLNTLCADSKNVVFIVSGRGRDSLDEWFTSCTKLGIAAEHGYFLRWSQSEEWKIGGKSSDFGWIQIAEPVMKLYTEATDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAETIFSTMAEQGNPVDFVLCVGDDRSDEDMFETISSAMSRNILSAKSSVFACTVEQKPSKAKYYLDDTTEVISMLASLADVSEDNP 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3092 1016 Gene3D Glycogen Phosphorylase B; 485 698 - -
Bisa02g3092 1016 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 890 1016 - -
Bisa02g3092 1016 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 760 877 - -
Bisa02g3092 1016 Pfam Glycosyltransferase family 20 231 714 IPR001830 GO:0003824|GO:0005992
Bisa02g3092 1016 SUPERFAMILY HAD-like 761 1009 IPR036412 -
Bisa02g3092 1016 NCBIfam trehalose-phosphatase 759 1009 IPR003337 GO:0003824|GO:0005992
Bisa02g3092 1016 Gene3D - 889 1016 IPR023214 -
Bisa02g3092 1016 Gene3D - 760 860 IPR023214 -
Bisa02g3092 1016 FunFam Alpha,alpha-trehalose-phosphate synthase 485 698 - -
Bisa02g3092 1016 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 199 1009 IPR001830 GO:0003824|GO:0005992
Bisa02g3092 1016 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 224 483 - -
Bisa02g3092 1016 Coils Coil 488 508 - -
Bisa02g3092 1016 CDD HAD_TPP 762 1001 - -
Bisa02g3092 1016 CDD GT20_TPS 231 714 IPR001830 GO:0003824|GO:0005992
Bisa02g3092 1016 Gene3D Glycogen Phosphorylase B; 223 484 - -
Bisa02g3092 1016 Pfam Trehalose-phosphatase 764 998 IPR003337 GO:0003824|GO:0005992
Bisa02g3092 1016 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 230 718 - -
Bisa02g3092 1016 NCBIfam HAD-IIB family hydrolase 763 963 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3092 Bisa-ChrBisa02 78238491 78243670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3092 169 1013 Trehalose Biosynthesis Gene Families AT1G06410 75.858 0.0 1345