Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3087 ATGGACCGTAGATTCAAGCTAGAAGATCCCGAACCGGAAGCCGTATCGGAAACCGGACCGGACTCTCCTTCCTCCGGAGACGACACCAAAACTGAAGCACCGTCTCCTAAGAAAAGGAGGGGGATGCAGAAGAAGGTGGTAGTCGTACCGATCGGTGACGTGGACGGATCTAAGAGCAAAACCGAGGCGTATCCACCGTCCGATTCATGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAGGGCTCGCCATATCCCAGGGGATATTATCGATGTAGCAGCTCAAAGGGTTGTCCCGCGAGGAAACAAGTTGAGCGAAGTCGTGTGGACCCCACAATGCTCATCGTCACCTACGCCCACGACCACAACCACTCCGTCCCCGCCGGTAAGTCGTTTCACTCCGCCAACACCTCCTCCTCCTCCTCCTCAGCCCCCGCAACCGCCGTTCACGACGGCGCTCCCACCGAATCGGACTCCAGAGCCGTGCCGGAGCAGGATCTGACGGTGTTCGCGAGTCATCTCGATCTCGAACTCGACGGCGACTCGGCGGTTCTGCTCGGCGACCACCACGGCCAGTTCGGATGGTTTGATGACGTGGCGTCCACGACGAGAGTGCTGGAAAGCCCGTTCTGCGGGGAGGTGGAGGATATGGCGTTGACGATGATGGAGGAGGAGGAAGACCAGTCGCTCTTCGCCGACCTCGGCGAGTTGCCGGAGTGCTCGGTGGTTTTCCGGCGAAGGGATATTTCGAGCGCGATTCAATGCGGTGGGATCACGGGATAA 783 0.5939 MDRRFKLEDPEPEAVSETGPDSPSSGDDTKTEAPSPKKRRGMQKKVVVVPIGDVDGSKSKTEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTMLIVTYAHDHNHSVPAGKSFHSANTSSSSSSAPATAVHDGAPTESDSRAVPEQDLTVFASHLDLELDGDSAVLLGDHHGQFGWFDDVASTTRVLESPFCGEVEDMALTMMEEEEDQSLFADLGELPECSVVFRRRDISSAIQCGGITG 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3087 260 MobiDBLite consensus disorder prediction 126 161 - -
Bisa02g3087 260 SMART WRKY_cls 66 126 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g3087 260 ProSiteProfiles WRKY domain profile. 61 127 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g3087 260 SUPERFAMILY WRKY DNA-binding domain 61 127 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g3087 260 Gene3D WRKY domain 54 128 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa02g3087 260 Pfam WRKY DNA -binding domain 68 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa02g3087 260 MobiDBLite consensus disorder prediction 1 80 - -
Bisa02g3087 260 MobiDBLite consensus disorder prediction 129 148 - -
Bisa02g3087 260 FunFam WRKY transcription factor 65 53 127 - -
Bisa02g3087 260 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 17 242 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3087 Bisa-ChrBisa02 78187362 78189282 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3087 1 254 WRKY Transcription Factor Family AT3G58710 50.566 3.11e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa02g3087 WRKY 4e-25 CL0274