Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3046 ATGCCACAGTCGTGTCCACCCATTCCTAGCCGCCAAATCGGATTCCGGAAAGAAAATCTCCCGACAAGGCGTAGCGAAAGAGGAAAGAGTACAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAAAAGAAGGAATGGAGGAGTGCGCGTTGTGTGGGAAGCGAGCCAGGATGTACTGCGAGTCGGACCAGGCGAAGCTATGCTGGGACTGCGACGACAAGGTTCACGGAGCCAACTTTCTGGTGGCGAAGCACACTAGGGTTCTTCTGTGCTGTGCCTGTCAATCTTCCACTCCATGGCAGGCCTGCGGTCCCAAGCTCACCCCCACCCACTCCCTCTGCCTCCACTGCGCCACCAATCCTGCCTCCAGTTCCCACAACGAAAGAGAAGATGCTGATCATGATCGTCATGATCATCGTGATTCTGAGGATGATGACGGAGATTCTAATTCTGATGCTGGTTCCCGTTCTGATCTTGGTTCTGATGAGGACGACGAAGGGGAGGACGAGGAGGAGGGGGAAAATCAGGTGGTGCCATGGTCATCTGCTTCTGCATCTGCTTCGTTGCCATCGCCGCCTCTTCGGAGTTCTGCTTCTGCTGGTGCTGGTTTAGCGTGGAAGCGGGCGCGAGGGAATTCGTTTGCCAATTCAGATGATGAGAGAGGTTGCTCCTCTTCCGAAATGCGCTCTGCTGCACAATTACCCGATGATGACCTATTATCCTCTTGGAGAATCTTCAGTCCATGGAAGCAACCTAGAACTACTAAGCGTAGCCAATTACCCCTGGTTGAAGATGATGCACTATGGAGAGACCTGAACCGTTGA 828 0.5254 MPQSCPPIPSRQIGFRKENLPTRRSERGKSTEKKKKKKKKKKKKEGMEECALCGKRARMYCESDQAKLCWDCDDKVHGANFLVAKHTRVLLCCACQSSTPWQACGPKLTPTHSLCLHCATNPASSSHNEREDADHDRHDHRDSEDDDGDSNSDAGSRSDLGSDEDDEGEDEEEGENQVVPWSSASASASLPSPPLRSSASAGAGLAWKRARGNSFANSDDERGCSSSEMRSAAQLPDDDLLSSWRIFSPWKQPRTTKRSQLPLVEDDALWRDLNR 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3046 275 MobiDBLite consensus disorder prediction 162 176 - -
Bisa02g3046 275 CDD Bbox1_BBX-like 50 91 - -
Bisa02g3046 275 MobiDBLite consensus disorder prediction 127 161 - -
Bisa02g3046 275 MobiDBLite consensus disorder prediction 29 43 - -
Bisa02g3046 275 MobiDBLite consensus disorder prediction 218 232 - -
Bisa02g3046 275 ProSiteProfiles Zinc finger B-box type profile. 45 91 IPR000315 GO:0008270
Bisa02g3046 275 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 49 235 - -
Bisa02g3046 275 Pfam B-box zinc finger 48 90 IPR000315 GO:0008270
Bisa02g3046 275 MobiDBLite consensus disorder prediction 1 44 - -
Bisa02g3046 275 MobiDBLite consensus disorder prediction 122 236 - -
Bisa02g3046 275 SMART bboxneu5 45 91 IPR000315 GO:0008270
Bisa02g3046 275 MobiDBLite consensus disorder prediction 178 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3046 Bisa-ChrBisa02 76754336 76756054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3046 48 228 C2C2-CO-like Transcription Factor Family AT4G27310 44.059 2.25e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g3046 zf-B_box 1.3e-07 No_clan