Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3027 ATGGGAAGGAAGAAGGACCCATATTGGCAATATGTTGATATTGTGGAAGAAAACACAGTGAAGTGCAAATTTTGTGGAGACGAATTTGCTGGAGGAGCTACAAGGATTAAGGGGCATTTATCTGGAATTAAAAGGAAAGGAATTCATGTATGTCATAAAGTTCCTACAAATGTGCGACTTGCTGCAGCTTCCATATATGATGATTATGAGAGGTACACATATTCTAGATTTTTAGAAACCTCATCAATTCAAATTGATTCTCCTCTGGATGTGCAAATTGATTCTTTTGAGGAGAACCTTGTTAATTCAGATTCTCCAAGTGGATGTACAAAAGGTTATCAATTGGATAGAAATGGTTTAATAAGTGAGCAATTTGAAGATCCTATTAAAGATATAGTATATCAGCTGAGGTACCAAGAATGGAGAAAAGGAAGGGTGGTTGCAGAACATGAAATTCAAAAGGAAGAAGAGAGCGAGGGAGAGATAGAGGTCATGAAGGATATGAATGACATGGATGGGATTGATGAAGGGATCATATTACTTGGTTTTCAGTTTCACCCGACAGACGTGGAGCTTGTTAGTTTTTACCTCAGAAGAAAGATTCAGCAGAAATCTCTTCTTGTTGAAATAATTAAGCAATTGGATATTTACAAATACGAGCCATGGGAACTTCCAGCTAGAGTTGCTACTCCACTTGCTGAACAATTCTAG 711 0.3741 MGRKKDPYWQYVDIVEENTVKCKFCGDEFAGGATRIKGHLSGIKRKGIHVCHKVPTNVRLAAASIYDDYERYTYSRFLETSSIQIDSPLDVQIDSFEENLVNSDSPSGCTKGYQLDRNGLISEQFEDPIKDIVYQLRYQEWRKGRVVAEHEIQKEEESEGEIEVMKDMNDMDGIDEGIILLGFQFHPTDVELVSFYLRRKIQQKSLLVEIIKQLDIYKYEPWELPARVATPLAEQF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3027 236 Pfam No apical meristem (NAM) protein 182 227 IPR003441 GO:0003677|GO:0006355
Bisa02g3027 236 ProSiteProfiles NAC domain profile. 179 236 IPR003441 GO:0003677|GO:0006355
Bisa02g3027 236 SUPERFAMILY NAC domain 179 228 IPR036093 GO:0003677|GO:0006355
Bisa02g3027 236 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 178 226 - -
Bisa02g3027 236 ProSiteProfiles Zinc finger BED-type profile. 3 58 IPR003656 GO:0003677
Bisa02g3027 236 Pfam BED zinc finger 6 44 IPR003656 GO:0003677
Bisa02g3027 236 Gene3D NAC domain 188 235 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3027 Bisa-ChrBisa02 76414170 76419625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3027 169 230 NAC Transcription Factor Family AT1G26870 59.677 1.63e-19 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g3027 NAM 6.4e-11 No_clan