Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3026 ATGGCCTCTTCACACCAACAAACCCCACGTGCTTCACGCATGCACTACTACGCCACCGATGACAGCGACCACGACGACCTCGTTAATGACAGCCAGGACGACGAGGAGGAAGAAGAAGATGTAGGAGAAGAAGAAAACGACTTCGTCAGCAACGATAAAAAAGACCACGAGAATAAGGTTGCTTGGTGCGGTTCGGGGCGGGTGGGATGTCGGATGGGTCGGGTGGTGGATCCGAGAGTAAAATGGGTGCAAGAGTGGAACAGGGTGTTCCTGCTGGTGTGCGCGGCGGGGCTGTTCGTGGACCCGCTCTTCTTCTATGCGCTCTCCGTGAGCGACACGTGTATGTGCATCTTCGTCGATGGGTGGTTCGCCGTCACCGTCACGGCGCTCCGCTGCATGACGGACGTCTTGCACGTGTGGAACATGTGGCTACAGCTCAAGATGGCCAAACGTGCCTTTGGCGTGGGCTCGGCAAGTGGGCTCGCTGCAGACTCGAACCCTCGCTCCACTGCTCTTCGCTATCTCAAGGCCAAGAAGGGCTTCTTCTTTGACCTCTTCGTTATTCTTCCTTTACCCCAGATTGTGCTATGGGTGACGATTCCATATCTGTTGGAGAAAGGGTTAGTGACATTGGTGATGACAGTGTTCTTAATAATGTTCTTCTTCCAATACGTTCCGAAGATCTATCACTCTGTGTGCCTCTTGCGTCGCATGCAAAACCTCTCTGGCTATATCTTTGGAACCGTTTGGTGGGGAATCGCTCTCAACATGATCGCTTACTTCGTGGCTTCCCATGCAGCAGGAGCGTGTTGGTACTTGCTGGGGATACAAAGGGCGGCGAAGTGCCTGAAAGAGCAATGTGGGAGGACCAATGATTGTGGGCTTAGAATTCTGTCATGCAAACAGCCCATTTATTACGGAGCCACTGGCACCGTGAGGGACAGGCCCAGGCTTGCATGGGCCCACAACAGGGAAGCCCGCTCCACCTGCTTGGATTCCTCCGACAACTACGATTATGGAGCTTACAAGTGGACTGTTCAACTCCTCACTAATGACAACCGCTTGGAAAAGATCCTCTTCCCCATCTTCTGGGGCCTCATGACCCTCAGTACTTTCGGGAACCTGGAGAGCACGACCGAATGGATCGAAGTTGTATTCAACATTGTGGTGTTGACCAGTGGCCTTCTTTTGGTCACTATGTTGATCGGAAACATCAAGGTGTTCTTGCATGCAACGACGTCAAAGAAGCAAGCGATGCAGTTGAGGATGAGGAACATGGAATGGTGGATGAGGAAAAGGAAGTTGCCGCAGGGGTTCCGGCAGCGAGTTCGGAACTACGAACGCCAGCGGTGGGCTGCAACGCGTGGGGTGGACGAGTGCCACATCATCAGGTATCTGCCGGAGGGACTCCGACGGGACATCAAGTACCATCTCTGCTTGGATTTGGTCAGGCAGGTGCCACTGTTTCAGCATATGGATGAGCTGGTGCTGGAGAACATTTGCGACCGTGTCAAGTCCCTCATATTCACTAAGGGAGAGACTATAACGAGAGAGGGAGACCCAGTCCAGAGGATGCTATTCGTGGTAAGGGGCCACTTACAGAGCAGCCAGGTCCTGAGAGACGGCGTCAAAAGCTGCTGCATGCTAGGCCCCGGCAACTTCAGCGGCGACGAGCTGCTCTCCTGGTGTCTCCGGCGGCCCTTCATAGAGCGCCTTCCACCTTCGTCCTGCACTCTGGTCACGCTGGAGACGACGGAGGCCTTCGGGCTGGAGGCCGAGGACGTCAAGTATGTGACACAGCACTTCAGATACACCTTTGTCAAGGAGAAGGTGAAGCGCAGTGCTATGTACTACTCGCCGGGCTGGAGGACGTGGGCCGCCGTTGCCATCCAGCTGGCGTGGCGGAGGTACAAGCATAGGTTGACTCTTTCCTCCCTGTCCTTCATAAGGCCTCGCAGGCCTGTGTCGCGGTGCTCCTCCATGGGAGAGGATAGGTTGAGGTTGTACACTGCTTTGTTGACTTCTCCCAAGCCCAATCTCGATGACTTTGACTTTTGA 2058 0.5452 MASSHQQTPRASRMHYYATDDSDHDDLVNDSQDDEEEEEDVGEEENDFVSNDKKDHENKVAWCGSGRVGCRMGRVVDPRVKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDTCMCIFVDGWFAVTVTALRCMTDVLHVWNMWLQLKMAKRAFGVGSASGLAADSNPRSTALRYLKAKKGFFFDLFVILPLPQIVLWVTIPYLLEKGLVTLVMTVFLIMFFFQYVPKIYHSVCLLRRMQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLKEQCGRTNDCGLRILSCKQPIYYGATGTVRDRPRLAWAHNREARSTCLDSSDNYDYGAYKWTVQLLTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWIEVVFNIVVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLRMRNMEWWMRKRKLPQGFRQRVRNYERQRWAATRGVDECHIIRYLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSCTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSAMYYSPGWRTWAAVAIQLAWRRYKHRLTLSSLSFIRPRRPVSRCSSMGEDRLRLYTALLTSPKPNLDDFDF 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3026 685 Gene3D Helix hairpin bin 413 479 - -
Bisa02g3026 685 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 54 645 - -
Bisa02g3026 685 Pfam Ion transport protein 86 405 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bisa02g3026 685 FunFam cyclic nucleotide-gated ion channel 4 486 604 - -
Bisa02g3026 685 SUPERFAMILY cAMP-binding domain-like 414 602 IPR018490 -
Bisa02g3026 685 Gene3D Jelly Rolls 486 604 IPR014710 -
Bisa02g3026 685 Pfam Cyclic nucleotide-binding domain 509 596 IPR000595 -
Bisa02g3026 685 SMART cnmp_10 488 617 IPR000595 -
Bisa02g3026 685 ProSiteProfiles cAMP/cGMP binding motif profile. 488 567 IPR000595 -
Bisa02g3026 685 MobiDBLite consensus disorder prediction 1 50 - -
Bisa02g3026 685 SUPERFAMILY Voltage-gated potassium channels 82 409 - -
Bisa02g3026 685 CDD CAP_ED 488 594 IPR000595 -
Bisa02g3026 685 MobiDBLite consensus disorder prediction 26 46 - -
Bisa02g3026 685 FunFam Cyclic nucleotide-gated ion channel 1 415 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3026 Bisa-ChrBisa02 76362300 76373005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3026 63 684 Ion Channels AT5G54250 77.445 0.0 1011