Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3017 ATGATTCGTCCAACTCTTTTCAGAATGTTGCACTATGATCTCATCTTCTGGGGTTTCTGGGAAACAAATGCTGGATCGAACTCTGTTTCACCAGTTGGTTTAGCTGTGCCTCCTGCATTAGCTCCTGAGACAGATGTTAAACCTTTTATTCCAGGACCACCAGACTCAGCAGACAATTTCTTAAGTGAAACATTTTCATCTTCTGACTCTGAGGTAGACAGTGCAAGTTGTTGTGCAATTTCATCCCGATTGATAAATTCCCACCACCTTCCGAAGATGAGTAAGGGGGAGAATTTGAAATTACTGGAAAACTCTAGTTCTGGAATTATTCCTTTATTTGAAAAAGTACTAACGGCTAGTGACACTGATCTCAAGAAATCACGTCTTGTGAATCCGAAGAAATATGCAAAGGCTTATTTTCCAGAAATTCATGAGCCTCTGGGAATGAAACTTGAAGTTCAGGATACAACAGGGAGAAACTGGAAGTTTAACTACCGATGTTGGCTTAATTCTCACAGCATGATGTATGTTCTAGGAGGGCTTAAAGATTATATGGTCTTGATGCAGTGGCAAGCTGGTGATATAGTAACATTTTCTCTAATTCAGCCAGAGGGTAAATTGCTTATGGGAACTAAAAAGCCATCAACCTTTTCACCACCGCTAGAGTGCAGGCCATTAGATCTCTTTAGTGTGCCAGATGCAATAGCCTGGACAGATCTCCCCTGTGGTGGCTTTTTGTGTGGCACTGTTGGTAGTGCTTACATCATTACATTTTCATATGTTACCTTAGGTCTTCACTGTCAGAATTCTTTCCCTGCCATTTCCTGTTGCTGTTTATTAGTTACAACTTGTGCTGTTCCTTCCTTGCTTTCTTTTTACGCATATGGTCCTGTTTTCAGTATTTTAGCTCTTCAACTTTGTGGTGGAGCTGAAGTAGCTATACCAACTTGGTTTTGTGTGACTCAGGTGTATGCATGCGATATTTTACCATGCCAGATCAGATCATGGAAATAG 1014 0.4083 MIRPTLFRMLHYDLIFWGFWETNAGSNSVSPVGLAVPPALAPETDVKPFIPGPPDSADNFLSETFSSSDSEVDSASCCAISSRLINSHHLPKMSKGENLKLLENSSSGIIPLFEKVLTASDTDLKKSRLVNPKKYAKAYFPEIHEPLGMKLEVQDTTGRNWKFNYRCWLNSHSMMYVLGGLKDYMVLMQWQAGDIVTFSLIQPEGKLLMGTKKPSTFSPPLECRPLDLFSVPDAIAWTDLPCGGFLCGTVGSAYIITFSYVTLGLHCQNSFPAISCCCLLVTTCAVPSLLSFYAYGPVFSILALQLCGGAEVAIPTWFCVTQVYACDILPCQIRSWK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3017 337 CDD B3_DNA 111 207 IPR003340 GO:0003677
Bisa02g3017 337 SMART B3_2 113 215 IPR003340 GO:0003677
Bisa02g3017 337 Gene3D - 91 216 IPR015300 -
Bisa02g3017 337 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 86 216 - -
Bisa02g3017 337 ProSiteProfiles B3 DNA-binding domain profile. 114 215 IPR003340 GO:0003677
Bisa02g3017 337 Pfam B3 DNA binding domain 113 208 IPR003340 GO:0003677
Bisa02g3017 337 SUPERFAMILY DNA-binding pseudobarrel domain 110 207 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3017 Bisa-ChrBisa02 76146757 76163197 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3017 91 213 B3 DNA Binding Superfamily AT4G32010 52.033 7.49e-31 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa02g3017 B3 4.2e-12 CL0405