Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g3014 ATGAACGGGAAGGCTAACGTTTCTAAAGAGCTCAACGCCAAGCACAAAAAGATACTGGAAGGACTTCTTAAACTGCCAGAAAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGTGTGAACCTAGGGATCTTTATATGCATGCAGTGTTCAGGAATACACCGGAGTCTTGGGGTACATATTTCAAAGGTTCGGTCCGCAACTCTGGACACCTGGCTTCCGGAGCAGGTTGCATTCATTCAATCCATGGGAAATGACAAAGCTAATAGTTACTGGGAAGCAGAGTTACCCCCAAATTACGATAGAGTTGGAATCGAGAATTTTATTCGTGCAAAATATGAAGAGAAGAGATGGATTCCAAGGGATGGAAAACCAAAATCACCTTCTAGGCAGCTGGAAGACAGGACTTCTTCAAGTTGGCAGAGGCCTGCAGAAAGAAGTGGACATGGTTATGCATCTGCTTCTGAGAACACTTCTCATGAAAGGAAGAAAATTCAGGCACCAAATACAGTTCCTGCCACAAGAATTAGTGTTCCCGTTCCCCCAAAAGCACCTGAGCAGGTAACTCCTCTTACAAAACCTCAGCATGTAGAGAAAGTGGAACCAGTGGCACCACAACTGCAAGCTGAAACAACTAAACAGGCTACTGAGGTGGCTCAAAATATCCCTCCAAAAGTTGACTATGCTACAGACCTTTTCAACATGTTGTCCATGGATGGCCCAAGTGAAAATGGCTCAAAGGAAACTGGTGCTACAGCTGATGATGATAACTGGGCAGGTTTTCAGTCCGCTACAGAAGCTTCAACGACTGAGAAGACTGCTTCCACAAAAGCAGTTGAGAGCACTTCCAAGCCTAATTCTGGAATTGAGGATCTATTTAAAGATTCACCTTCAGTGACACTTGTAGTTCCAGAAAAACCACAGAAAGATCTGAAAAATGATATCATGAGCCTCTTTGAGAAGTCCAATATGGTCTCTCCATTTGCTATGCATCAGCAGCAGATTGCCATGCTGGCAGAGCAACAGTCCCTTCTAATGGCTGCTGCAGCTAACTCTGCTGGTGGGAACCCCAAGTTCCCTGGTAGTATACAACAACCTGGACTGAATGGGTCCAATATACCTGTCCCAAGTTGGCCAGCTTCTGGCTACCCAATTCCTGGAGTATTGCCCACTGGTGGTCAGGGAGAGCTGCAGAAACTTATGCAGACTAGAAACATTACTCCGGCGTATCCAGCAGTGAGTTCTGTGCAGTATCCACCATCTAGTTTCTACACAATGGGGCAGGTTACTCCAGTTAAGGGTATGACAACAACCGAAATGAGTAAACCTCAGTCAGCAGCAGCTACAGTGTCATCATCAACTTCTTCACAGGCAGCTAAGGATTATGACTTCTCCTCTTTAACACAAGGGTTTTTTGCCAAACACTGA 1440 0.4535 MNGKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNDKANSYWEAELPPNYDRVGIENFIRAKYEEKRWIPRDGKPKSPSRQLEDRTSSSWQRPAERSGHGYASASENTSHERKKIQAPNTVPATRISVPVPPKAPEQVTPLTKPQHVEKVEPVAPQLQAETTKQATEVAQNIPPKVDYATDLFNMLSMDGPSENGSKETGATADDDNWAGFQSATEASTTEKTASTKAVESTSKPNSGIEDLFKDSPSVTLVVPEKPQKDLKNDIMSLFEKSNMVSPFAMHQQQIAMLAEQQSLLMAAAANSAGGNPKFPGSIQQPGLNGSNIPVPSWPASGYPIPGVLPTGGQGELQKLMQTRNITPAYPAVSSVQYPPSSFYTMGQVTPVKGMTTTEMSKPQSAAATVSSSTSSQAAKDYDFSSLTQGFFAKH 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g3014 479 CDD ArfGap 19 117 - -
Bisa02g3014 479 MobiDBLite consensus disorder prediction 268 293 - -
Bisa02g3014 479 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 479 IPR044520 GO:0005096
Bisa02g3014 479 MobiDBLite consensus disorder prediction 242 261 - -
Bisa02g3014 479 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Bisa02g3014 479 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Bisa02g3014 479 MobiDBLite consensus disorder prediction 268 296 - -
Bisa02g3014 479 MobiDBLite consensus disorder prediction 124 201 - -
Bisa02g3014 479 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Bisa02g3014 479 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Bisa02g3014 479 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Bisa02g3014 479 Gene3D Arf GTPase activating protein 2 129 IPR038508 -
Bisa02g3014 479 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bisa02g3014 479 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Bisa02g3014 479 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g3014 Bisa-ChrBisa02 76079690 76085693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g3014 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 5.28e-30 117