Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2985 ATGAGCAAAGCCGGGGACGAAGAAGAGGAAGACGAGTGCTTCTACGAGTCCCACGACCGCTTGGTTTCGTCATCTTGCTCTTGTTCCACTTCCAACTCCGACGACGACAACGACTCCAATTCCAACTCTCCCAATTATGGTTCAGAGCAGCCCTTCCCCGTCCCCAAATTCCCACTCGCCATGTCCAAGTATGACATATGGATCTCCGAACCGTCCTCGGTCTCGGAACGCCGGACCCGTCTCCTCCGCGAGATGGGTCTCAGCGGCGACCCATCCTTGTCCCGGGGAAAGCCTGCTTCCGCCGCTGATCTTAGAGATGCGGGCAATGGAGAGTTTGGGCGATCGGCGTCGTCCGATCACTTGAGCAGCCAACGACAGGGGGAGAGTTCCGGTTGCACCGCCGGGATGTTCCAATCGAAATCAGACGGTGCGGCGGATCGCAGTGACTTGTCTGTCGGTCAGTCTTATGATCGTTGTAATAAGTCTTCTTCTTCTTCTTCTTTTTGTTCGTCTTCTTCAATTCTTTCTATTCATTCGGTCGCACCAGAGACCGGCTCATTTGTAAATAGCCGTAATCACGTCCTTAAGTCAAGGAGCGGTAATGGCAATGGATCACCAGTTGCTAGTGCCGCTTCCCCCAATAAGCCGCCTTCGGGAAAAAATTGTAAAAGGTTGGATGACATTCAAAGCGAATCCACGAACTTGAGTGTGGATGACGGTCATAGTTCGGTGGTGCCAGTATCAGGGATTACAGGTGGAGACGTGGAGGAGGTTGCGGACTGTAATGGGGTTTACAGGGAAAATGAACAAGTGTGCACCATAAGAGATCTCGATAATGGGAAAGAGTTTGTGGTCAAGGAAATTAGGGAAGACGGGATGTGGAACAAACTCAAGGAAGTGGGGACTGGAAGGCAGTTGACTATGGAGGAATTTGAGATGACAGTTGGGCATTCACCAATTGTTCAAGAATTAATGAGACGGCAACATGTTGAGGAGGGTAACAAGGATAATGTAGATTCTAATGCAAGTGGTGGTAGTGGAGGTGGTTCCAAGCAGAAGAAGAAAGTGGGTTGGTTTAAAAGTATAAAGAGTGTTGCAAGCACCGTGACAGGTCTTAAAGAGAGACGGAGTAGCGATGAAAGAGATACTTCATCAGAGAAGGGTGGGCGCAGGTCAAGCTCTGCCACGGATGATAGTCAGGATGGTTCATTTCATGGGCCTGAGAGAGTAAGGGTTAGGCAGTATGGGAAGTCTTGTAAAGAGCTTACAGGACTTTATAAAAGCCAGGAGATACAGGCTCATAATGGATCTATATGGAGCATGAAGTTCAGTTTGGATGGGAAATATCTTGCTAGTGCAGGTGAGGATTGTGAAATACATGTTTGGCAAGTTGTGGAGTCAGAGAGGAAGGGGGAGCTGCTGATGGAGAAACCAGAGGACGGGAGCATGAACATGTTGTTTGTTGCGAATGGGTCGCCGGAGCCAACTCTGCTGTCCCCTGCGATGGACAATTATCCGGAAAAGAAGAGAAAGGGGAGGTCATCCATAAGCAGAAAATCATTGAGCTTTGACCAACTAGTGGTGCCAGAGACTATTTTTGCACTTACAGAAAAACCCATTTGCTCATTCCAAGGCCATCTTAACCATGTGCTCGACCTATCTTGGTCCAAGTCTCAGCATTTGCTCTCATCTTCCATGGACAAAACAGTGCGGCTGTGGCACTTGGCTAGCAAGTCCTGTTTGAAAGTTTTTTCACACAGTGACTTTGTAACCTGCATCCAGTTTAATCCTGTTGATGATAGATACTTCATTAGTGGATCATTGGATTCTAAGGTTCGCATATGGAGCATTCCTGATCGTCAAGTTGTTGATTGGACTGATCTGCATGAGATGGTCACTGCTGCTTGTTATACACCTGATGGGCAGGGTGCACTAGTTGGTTCATACAAGGGTAGCTGCTATTTATATGATACATCTGATAACAAGCTGCAACAGAAAAGTCAGATAAATCTGCAGAACAAGAAAAAGAAATCACATCATAAGAAAATTACTGGCTTCCAGTTTGCCCCAGGAAGTTCTTCAGAAGTACTCATCACATCTTCTGATTCAAGAATTCGGGTTGTTGATGGTGTTGATCTGGTGCATAAGTTTAAAGGATTTCGCAACCCTAATAGCCAAATTTCTGCCACCCTCACAGCAAATGGTAAATACGTAGTCTCTGCAAGTGAGGATTCCCATGTATATATATGGAAAAATGAAGCTGATTGCAGACCTAACCGGAGCAAAGGTGTCAGTGTGACACAATCATATGAACATTTTCACTGTAAAGATGTGTCAGTGGCCATTCCTTGGCCTGGTATGGATGATGTGTGGGAAGTGCCTGATACTCTTGCTGAAGAACAAACTGGGGATGATATTAACCTGGATGAGGTCTTGTCTGCCAATCATCCCCCTACCCCGGTGGAGGAAAATTTTGGTACCGATGGTTCGCAACTGGCATCAGGGTGCAACAACAGTCCTCTTCATGGAACAATAGCAAGTGCAACGAACAACTACTTTTTTGATAGAATTTCTGCGACATGGCCAGAGGAAAAACTTGTTGTAGCTGCAAGGAACCGAACCCCTCGTGTCAGTGTGGATCTCTCAAGTGGGGTAAGCCAAAACATGTCGGCCTGGGGTGTGGTGATTGTAACTGCTGGCCTTCGAGGGGAAATTAGAACTTTCCAAAATTTTGGAATGCCACTTCGGATATAA 2754 0.4688 MSKAGDEEEEDECFYESHDRLVSSSCSCSTSNSDDDNDSNSNSPNYGSEQPFPVPKFPLAMSKYDIWISEPSSVSERRTRLLREMGLSGDPSLSRGKPASAADLRDAGNGEFGRSASSDHLSSQRQGESSGCTAGMFQSKSDGAADRSDLSVGQSYDRCNKSSSSSSFCSSSSILSIHSVAPETGSFVNSRNHVLKSRSGNGNGSPVASAASPNKPPSGKNCKRLDDIQSESTNLSVDDGHSSVVPVSGITGGDVEEVADCNGVYRENEQVCTIRDLDNGKEFVVKEIREDGMWNKLKEVGTGRQLTMEEFEMTVGHSPIVQELMRRQHVEEGNKDNVDSNASGGSGGGSKQKKKVGWFKSIKSVASTVTGLKERRSSDERDTSSEKGGRRSSSATDDSQDGSFHGPERVRVRQYGKSCKELTGLYKSQEIQAHNGSIWSMKFSLDGKYLASAGEDCEIHVWQVVESERKGELLMEKPEDGSMNMLFVANGSPEPTLLSPAMDNYPEKKRKGRSSISRKSLSFDQLVVPETIFALTEKPICSFQGHLNHVLDLSWSKSQHLLSSSMDKTVRLWHLASKSCLKVFSHSDFVTCIQFNPVDDRYFISGSLDSKVRIWSIPDRQVVDWTDLHEMVTAACYTPDGQGALVGSYKGSCYLYDTSDNKLQQKSQINLQNKKKKSHHKKITGFQFAPGSSSEVLITSSDSRIRVVDGVDLVHKFKGFRNPNSQISATLTANGKYVVSASEDSHVYIWKNEADCRPNRSKGVSVTQSYEHFHCKDVSVAIPWPGMDDVWEVPDTLAEEQTGDDINLDEVLSANHPPTPVEENFGTDGSQLASGCNNSPLHGTIASATNNYFFDRISATWPEEKLVVAARNRTPRVSVDLSSGVSQNMSAWGVVIVTAGLRGEIRTFQNFGMPLRI 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2985 917 MobiDBLite consensus disorder prediction 153 171 - -
Bisa02g2985 917 FunFam Transducin/WD40 repeat-like superfamily protein 389 492 - -
Bisa02g2985 917 PANTHER WD REPEAT DOMAIN 44 6 914 IPR040324 -
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 431 464 - -
Bisa02g2985 917 PRINTS G protein beta WD-40 repeat signature 561 575 IPR020472 -
Bisa02g2985 917 PRINTS G protein beta WD-40 repeat signature 603 617 IPR020472 -
Bisa02g2985 917 PRINTS G protein beta WD-40 repeat signature 450 464 IPR020472 -
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 543 577 - -
Bisa02g2985 917 Gene3D - 402 495 IPR015943 GO:0005515
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 583 617 IPR001680 GO:0005515
Bisa02g2985 917 FunFam WD repeat-containing protein 44 524 790 - -
Bisa02g2985 917 MobiDBLite consensus disorder prediction 373 394 - -
Bisa02g2985 917 MobiDBLite consensus disorder prediction 192 216 - -
Bisa02g2985 917 MobiDBLite consensus disorder prediction 192 221 - -
Bisa02g2985 917 MobiDBLite consensus disorder prediction 115 137 - -
Bisa02g2985 917 SMART WD40_4 536 574 IPR001680 GO:0005515
Bisa02g2985 917 SMART WD40_4 710 751 IPR001680 GO:0005515
Bisa02g2985 917 SMART WD40_4 619 657 IPR001680 GO:0005515
Bisa02g2985 917 SMART WD40_4 664 709 IPR001680 GO:0005515
Bisa02g2985 917 SMART WD40_4 424 463 IPR001680 GO:0005515
Bisa02g2985 917 SMART WD40_4 577 616 IPR001680 GO:0005515
Bisa02g2985 917 MobiDBLite consensus disorder prediction 333 355 - -
Bisa02g2985 917 Gene3D - 515 778 IPR015943 GO:0005515
Bisa02g2985 917 MobiDBLite consensus disorder prediction 370 412 - -
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 431 472 IPR001680 GO:0005515
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 583 617 - -
Bisa02g2985 917 ProSiteProfiles Trp-Asp (WD) repeats profile. 543 583 IPR001680 GO:0005515
Bisa02g2985 917 MobiDBLite consensus disorder prediction 20 49 - -
Bisa02g2985 917 Pfam WD domain, G-beta repeat 430 462 IPR001680 GO:0005515
Bisa02g2985 917 Pfam WD domain, G-beta repeat 714 751 IPR001680 GO:0005515
Bisa02g2985 917 Pfam WD domain, G-beta repeat 538 573 IPR001680 GO:0005515
Bisa02g2985 917 Pfam WD domain, G-beta repeat 579 616 IPR001680 GO:0005515
Bisa02g2985 917 MobiDBLite consensus disorder prediction 1 55 - -
Bisa02g2985 917 MobiDBLite consensus disorder prediction 73 171 - -
Bisa02g2985 917 SUPERFAMILY WD40 repeat-like 425 752 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2985 Bisa-ChrBisa02 75510792 75516262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2985 530 748 U-box Gene Family AT1G04510 27.083 1.02e-06 50.4