Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2970 ATGGAACCGGCATGCTTAGACTGTGATAAGGATATCTTGTGTAAGAAAAAATTGAAATCCATTTCTGCACAGACAGCAATCTGTGATAGTGAAAATGGTTGCTTTGATTGCAATATATGCTTGGAGTCAGCGCATGACCCTGTGGTCACTCTGTGTGGCCACCTGTACTGCTGGCCCTGCATATTTAGGTGGCTTCATGTCCAGAGCTCCTCTGATGAATCAGACCAGCAGCAGCCTACATGCCCAGTTTGTAAAGCTGACATCTCTCATACTTCATTAGTCCCCCTTTATGGACGTGGAACATCTAGTTCAGACTCTGAAGCCAAGAAACCCCAGAAGGATCTAGGAATACCTCGCAGACCATCTCCTCACAGCTTGAATGCTATGTTAAACTCTACGAGTGCATCTTCTTCTCATCCTGGTCAACTCCACCCAAGTTATTTCCAGTCGCAAACGCAGCCATTTCATTATCAGCAATACCTCCCTCACCTTTATCGAGGCCATGCTGCAAGTGGATCACCTTACATTGGGGCTGCAGCTATGACTAGTTTCTCCAATCCAATTCTTGGTTTGTTTGGAGATATGGTCTTCGCAAGGATTTTTGGGAGCTCTGATGCTAATTTGTTGGCATATCCTTATGTCAATTATTACCCTCATAATGGAAGCGGCAGTCTTAGAATGAGAAGGCAGGAAATGCAGATTGACAAGTCTCTAAGCAGAGTATCTATCTTTCTCCTCTGTTGTATCATTCTGTGTCTTCTCTTTTATGGAATATCTTGTTGCTCTTCTCCCGAATGTCTGGTGCATTGCTCTCCTGATCTTACAGTTGGTGCGAACCAGATACTTCACCAGATTAATTTGGCAAGAAAAAATTTTCAGAAGATTTGTGTAGTGATGCCTAGTGATAATGGTCTTGTCATGGACTATTTTGATAAACACTTCTTTCCCACATAG 954 0.4319 MEPACLDCDKDILCKKKLKSISAQTAICDSENGCFDCNICLESAHDPVVTLCGHLYCWPCIFRWLHVQSSSDESDQQQPTCPVCKADISHTSLVPLYGRGTSSSDSEAKKPQKDLGIPRRPSPHSLNAMLNSTSASSSHPGQLHPSYFQSQTQPFHYQQYLPHLYRGHAASGSPYIGAAAMTSFSNPILGLFGDMVFARIFGSSDANLLAYPYVNYYPHNGSGSLRMRRQEMQIDKSLSRVSIFLLCCIILCLLFYGISCCSSPECLVHCSPDLTVGANQILHQINLARKNFQKICVVMPSDNGLVMDYFDKHFFPT 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2970 317 ProSiteProfiles Zinc finger RING-type profile. 37 85 IPR001841 -
Bisa02g2970 317 ProSitePatterns Zinc finger RING-type signature. 52 61 IPR017907 -
Bisa02g2970 317 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 94 IPR013083 -
Bisa02g2970 317 SMART ring_2 37 84 IPR001841 -
Bisa02g2970 317 SUPERFAMILY RING/U-box 34 97 - -
Bisa02g2970 317 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 24 253 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bisa02g2970 317 MobiDBLite consensus disorder prediction 125 144 - -
Bisa02g2970 317 Pfam RING-type zinc-finger 37 82 IPR027370 -
Bisa02g2970 317 MobiDBLite consensus disorder prediction 98 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2970 Bisa-ChrBisa02 75238056 75239744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2970 9 242 C3H Transcription Factor Family AT4G27470 48.523 4.24e-63 198