Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2964 ATGCCCCACTGGCACTTTCATCCCCGCCGTCCAAATTCCATCCAGCGGACCAGATTCAATGCAATGGGTCAATACCATTCTAAGGGTAAGTCAAGCGTTTTTTATTTTCCTTCTTATGCAAGCTTTCGGTTTCATCATCATCATGCATGCAATCTGAACCGTCCGATTATTCTGAAGTACCGGAGTACAACTGATGGAGACACAGTGGCACGATGGAGAGTGCATTCTGGTAGCAATTCTCTGTTGATGGACCCTGACGTCGTGGAAATCCCTCCCCCAATCCATCACACGTCGAAATTGATCAAGCAGAAGGCTATTCCGTGTGATGTGATTGACATTGACAATGATGAAGACTCTGCTGATTTAGTGTTAATTGGGGAAAAGGTTGGTGAAGGCAACAAGAGGAAGAAAATTGAAGCTGTTCATATGGGCTATGATGATCATCAAGATATGGAAGTGTCTGTCAATATCCCTTGCCCCTCTGGTGTGGAACAATTTGGACCAGCAAGTGGGATCAAGTCCTCCAATGGTTACGTTTCAGTTTCACACAACATGAATGTTGATGTTCACAGTTCTGATCTATCATATGAGGATGATGACTACAGTGCTTTTTTATCTGAAGAGTTCATGGATGTGGATACTTATTCTATATGGCAGGCGCACTTTGATCATATGGATATACCTGCTGGAATTGAGGCACCCATACCATGGATGTCCAGTTTTGATACAGGTTCAAACAATTCTGAAAGTAGTTCGTTGTATCCTTGGTGTCATACACAGTCAGACGCTAAAAATTCTCATGTGACAGTGAAATCTCAGCCTTCTTGGCCAACAGAGCCCCCTCATCCTATCCAAGGAACTTCGGCAGGTAGTTCTAGTATGCTAGCCAAAACAGATGCTATTGATCACTCTTTTGGAGTAGAGATGTCTTCTCCCCAGTTATTTATTCAATCTGCCCCGGGCAAAAAGGAATCAACTGCTTCACAACATGGAGGGGGTATGCTGAACTTGAATCTGTCATTAGGAATAGATTCAGCCAAAGATCAATGGTTCAAGTCCCATATTTTGAAGAAGCCTGCTGCTTTAACTGAATCAAGTAACAATGGTTTTTTAGTAGAAAATTCAGAGTCCATTAAGCTGCCACTGCCACATGCAATTGAACCACCATATTGGAGGAAATTTAAAAATGCAAAAAAGGCACAAGCCAAAGATGTTTTGTTTCATTCGAAGTCCCTTAATCCTGTAGAAGGGTTAAACCATTTTCCTGGAATAGAATCAGCAAACCCAATGTGGAAGAATTCTCCTAATTATAACCCATCTTTTATAAATCATTCAGCTCATTCAGGTTTCTATTATCCATATGATCCTCTTCATGCCCATCCTGAGCAAATGTATGGTAATATCTGGGTTCACAATTATGCTGGAGATGGAAAGCATGAAAGCACTGCTGACATCCCTGTTGTTTCCATCTCTGATGAAGATAGAGATGAAGTTCTGAGAAAATTTCAACAATTTAAACAGTTTGACACTGTTGAAGACACTTCAGACCATTACTATATTCGCAATAGTTATTCCTTGAAGCAGCATTCAAAGAATTGGTCAAAAAGAATCCAGGAAGAGTGGAAGATTCTGGAGAAGGATTTGCCAGACTCAATATTTGTCAGAGTTTATGAATCAAGGATGGATCTTTTGAGGGCTGTAATTATTGGAGCTGAGGGAACTCCTTATCATGATGGCCTCTTCTTTTTTGATGTTTTCCTTCCCAGCGGCTATCCCAATGTGCCACCAGACGTCCACTATCACTCTGGTGGTGTTCGGCTCAATCCAAATTTGTATAATTGTGGCAAAGTATGCCTTAGTCTACTTAATACTTGGTCTGGCAACAAAAACGAGAAGTGGCTTCCTGGCGTTTCAACAGTTCTACAAGTTCTAGTCTCTATACAAGGTCTGATCTTAAATACAAAGCCTTTTTTTAATGAACCGGGATATTCTCGCATGAGTGGTTCAGCAGTTGGTGAAATGAGGTCACTGCGGTATAATGAGGACACATTTATTTTATCATTGAAGACTATGACGTATATCATGAGAAGGCCTCCAAAGCATTTTGAGGACTTCATTGCGGGGCATTTCTGCAGCCGAGCTCAGGATATCTTGGTGGCATGTAAAGCATACATGGATGGTGCTCAAGTTGGCTGTTTGGTCAAAGGTGGTGTGCAGGATGTTGATGAGGGCGACAGGAGCTGCTCACAGCAGTTCAAGGAAACTTTAGCCGGATTTTTGACCAAGCTTGTTAGAGAGTTTACCCGAGTTGGGGCTGAGGACTGCGAGAAATTCTTGCCTCCAGCAACAACTGGGAACAAGCCGTCGAGCAGTATGTCCGAGTCTGCTGCTGCTACTGCCTGA 2403 0.4241 MPHWHFHPRRPNSIQRTRFNAMGQYHSKGKSSVFYFPSYASFRFHHHHACNLNRPIILKYRSTTDGDTVARWRVHSGSNSLLMDPDVVEIPPPIHHTSKLIKQKAIPCDVIDIDNDEDSADLVLIGEKVGEGNKRKKIEAVHMGYDDHQDMEVSVNIPCPSGVEQFGPASGIKSSNGYVSVSHNMNVDVHSSDLSYEDDDYSAFLSEEFMDVDTYSIWQAHFDHMDIPAGIEAPIPWMSSFDTGSNNSESSSLYPWCHTQSDAKNSHVTVKSQPSWPTEPPHPIQGTSAGSSSMLAKTDAIDHSFGVEMSSPQLFIQSAPGKKESTASQHGGGMLNLNLSLGIDSAKDQWFKSHILKKPAALTESSNNGFLVENSESIKLPLPHAIEPPYWRKFKNAKKAQAKDVLFHSKSLNPVEGLNHFPGIESANPMWKNSPNYNPSFINHSAHSGFYYPYDPLHAHPEQMYGNIWVHNYAGDGKHESTADIPVVSISDEDRDEVLRKFQQFKQFDTVEDTSDHYYIRNSYSLKQHSKNWSKRIQEEWKILEKDLPDSIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVFLPSGYPNVPPDVHYHSGGVRLNPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTVLQVLVSIQGLILNTKPFFNEPGYSRMSGSAVGEMRSLRYNEDTFILSLKTMTYIMRRPPKHFEDFIAGHFCSRAQDILVACKAYMDGAQVGCLVKGGVQDVDEGDRSCSQQFKETLAGFLTKLVREFTRVGAEDCEKFLPPATTGNKPSSSMSESAAATA 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2964 800 FunFam Probable ubiquitin-conjugating enzyme E2 23 495 771 - -
Bisa02g2964 800 MobiDBLite consensus disorder prediction 778 800 - -
Bisa02g2964 800 Gene3D Ubiquitin Conjugating Enzyme 491 772 IPR016135 -
Bisa02g2964 800 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 495 774 - -
Bisa02g2964 800 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 532 692 IPR000608 -
Bisa02g2964 800 SMART ubc_7 535 692 - -
Bisa02g2964 800 Pfam Ubiquitin-conjugating enzyme 536 656 IPR000608 -
Bisa02g2964 800 SUPERFAMILY UBC-like 520 701 IPR016135 -
Bisa02g2964 800 CDD UBCc 534 661 IPR000608 -
Bisa02g2964 800 MobiDBLite consensus disorder prediction 267 293 - -
Bisa02g2964 800 MobiDBLite consensus disorder prediction 783 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2964 Bisa-ChrBisa02 75128109 75137203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2964 500 783 Miscellaneous Gene Families AT2G33770 50.000 3.46e-86 291