Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2958 ATGGGTTGCGTCTGTTGCAAGCCCTCTGCCATTGAGGACAGTAGGGAGAGCCCACGGGAGCGATTATCAAGTAAGGCTTCATTGGACTCTCGTGTATCTAGGGCTACCTCATCGAGGAGGGAGGAGGGATATCGATTGAAGGACAGATATGATAGTAATGACAGTAGAGTTGCATTAATCGATAAGCAAGGAAATGGCTCTGTTCATTTGCAAGTTGATAATTTTGAAAGGAAGAGGGAGAAAATGGAATGTGTCGTTGCTCAGCATCCGGGAATTGGTAGTGTTCCAAAAGCCACAGAAGGGGAGCAGGTTGCAGCTGGGTGGCCTTCATGGCTGGCAGCAGTGGCTGGAGAGGCTATCAAGGGATGGCTGCCACGTCGTGCAGATTCTTTTGAGAAGCTGGATAAAATTGGCCAGGGAACTTATAGTAATGTTTATAGGGCTCGTGATCTTGAACAAAAGAAAATTGTTGCTCTAAAAAAAGTGAGGTTTGATAATCTTGAACCTGAGAGTGTTCGCTTCATGGCAAGGGAAATTCATATTCTACGTAGGCTTGATCATCCAAATGTTATAAAACTGGAAGGCCTGGTTACATCAAGGATGTCCTGCAGCTTATACCTTGTTTTTGAGTACATGGAACATGACTTGGCTGGGCTTGCTTCACATCCTGGATTAAAGTTTACAGAAGCACAGGTCAAATGTTACACGCAGCAACTTTTATGTGGACTTGATCACTGCCACAGCTGTGGTGTGCTGCACCGTGACATTAAGGGTTCCAACCTTCTGATTGACAACAGTGGAATCTTGAAGATTGCTGATTTTGGTTTGGCAAGTTTTTTCGATCCCAATCAAATTCAGCCATTGACGAGCCGAGTTGTCACTCTTTGGTATCGGCCTCCAGAGCTTTTGCTTGGAGCAACTTACTATGGCACTGCCGTAGACTTATGGAGTACAGGTTGCATACTTGCTGAGCTGTATGCTGGCAAGCCTATTATGCCTGGAAGAACTGAGGTTGAGCAGTTACATAAAATTTTTAAACTATGTGGTTCACCTTCTGAGGAGTATTGGAGAAAATCAAAGTTACCTCATGCAACAATATTTAAGCCCCAACAGCCCTATAGGCGTTGTGTTGCTGAAACATTTAAGGACTTTCCTGCACCTGCATTAGCACTCATGGAGACTCTTTTATCCATAGATCCTGCTGATCGTGGAACAGCAGCATCTGCTTTAAAGAGTGAGTTCTTCACAACAAAACCCTTACCTTGTGATCCTTCAAGCTTGCCTAAGTATCCTCCTAGCAAAGAATTTGATGCCAAAGTACGGGATGAAGAAGCTAGAAGACAAGGAGCAGCAGGAAGCAAAGGCCAGAGGCATGATCTTGAGAGAAAAGGAGCAAGAGAATCTCGAGCTGTTCCTGCACCTGATGCTAATGCTGAACTGCTCCTGTCTATGCAGAAGCGACAAGGGCAGCCCAATTCTAAGAGCCGTAGTGAGAAGTTTAACCCTCACCCTGAAGAAGTTGCTTCAGGATTTCCCATTGATCCCCCCAGGCCATCACAAGCTGTAGAATTAAGTATAGATCCCCAACTACAGCAACATAAAAGAGCCTCTCATTCAGGTCCACTTTGTAACCGCACTGGATGGTCAAAAGCTGGGAAAAATCAGGATGATGCGCCAAAAATTTCAACTGGAGGTGACCTATCAACCATGTCTGGCCTAGTTGCAGCAAGGAAGAGCATGTTGTCTGATGATCGCAGAGAACGGTCTGGATCATCACAAGCAGAGGTTCCAAAACTAATAAGCCGGTTCCCCGGATCCTTGAAGGAAGCCTCTGAATCGTTGATGCAACAGGATCAAAAGCATCACTTACAAGGCGTTGCTGCTCCTCCTCCGAAGGAAGAAGGGAGAGGCAGCAACAAAGATCCAATTCTTGTGGGTTACGGGTCAAAGGGTCATAAAATTCATTACTCTGGTCCATTGCTAGTTCCATCTAATAACATGGACCAGATGTTGAAGGACCATGATCGCCAAATTCAAGAAGCCGTTAGAAGAGCGCGTCTCGACAAGGCAAAGATTAGGAGACTCCAAGCTGAAGGGAACCAGATAAACACCAATTCATTATTTGTTTCTGGTCGCTGA 2139 0.454 MGCVCCKPSAIEDSRESPRERLSSKASLDSRVSRATSSRREEGYRLKDRYDSNDSRVALIDKQGNGSVHLQVDNFERKREKMECVVAQHPGIGSVPKATEGEQVAAGWPSWLAAVAGEAIKGWLPRRADSFEKLDKIGQGTYSNVYRARDLEQKKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNVIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASHPGLKFTEAQVKCYTQQLLCGLDHCHSCGVLHRDIKGSNLLIDNSGILKIADFGLASFFDPNQIQPLTSRVVTLWYRPPELLLGATYYGTAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWRKSKLPHATIFKPQQPYRRCVAETFKDFPAPALALMETLLSIDPADRGTAASALKSEFFTTKPLPCDPSSLPKYPPSKEFDAKVRDEEARRQGAAGSKGQRHDLERKGARESRAVPAPDANAELLLSMQKRQGQPNSKSRSEKFNPHPEEVASGFPIDPPRPSQAVELSIDPQLQQHKRASHSGPLCNRTGWSKAGKNQDDAPKISTGGDLSTMSGLVAARKSMLSDDRRERSGSSQAEVPKLISRFPGSLKEASESLMQQDQKHHLQGVAAPPPKEEGRGSNKDPILVGYGSKGHKIHYSGPLLVPSNNMDQMLKDHDRQIQEAVRRARLDKAKIRRLQAEGNQINTNSLFVSGR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2958 712 CDD STKc_CDK9_like 131 415 - -
Bisa02g2958 712 Gene3D Phosphorylase Kinase; domain 1 118 213 - -
Bisa02g2958 712 Pfam Protein kinase domain 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2958 712 Gene3D Transferase(Phosphotransferase) domain 1 214 454 - -
Bisa02g2958 712 FunFam probable serine/threonine-protein kinase At1g54610 118 213 - -
Bisa02g2958 712 FunFam probable serine/threonine-protein kinase At1g54610 214 455 - -
Bisa02g2958 712 ProSiteProfiles Protein kinase domain profile. 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2958 712 PANTHER CELL DIVISION PROTEIN KINASE 129 421 - -
Bisa02g2958 712 ProSitePatterns Protein kinases ATP-binding region signature. 137 160 IPR017441 GO:0005524
Bisa02g2958 712 SMART serkin_6 131 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2958 712 MobiDBLite consensus disorder prediction 524 551 - -
Bisa02g2958 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 251 263 IPR008271 GO:0004672|GO:0006468
Bisa02g2958 712 MobiDBLite consensus disorder prediction 434 469 - -
Bisa02g2958 712 Coils Coil 678 698 - -
Bisa02g2958 712 MobiDBLite consensus disorder prediction 486 639 - -
Bisa02g2958 712 MobiDBLite consensus disorder prediction 12 27 - -
Bisa02g2958 712 MobiDBLite consensus disorder prediction 421 474 - -
Bisa02g2958 712 MobiDBLite consensus disorder prediction 10 42 - -
Bisa02g2958 712 SUPERFAMILY Protein kinase-like (PK-like) 125 423 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2958 Bisa-ChrBisa02 75017436 75025487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2958 123 472 Core Cell Cycle Gene Families AT5G10270 51.913 5.23e-119 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa02g2958 Pkinase 2.4e-67 CL0016