Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2942 ATGTTGCTGCGGAGATATTTTTGGAGGGCTTTTCTCCAATGGGGGTTCTTGACCTGCTTTCTTTGCTTATCTCTGGGTCTAAAAACCCCCACCCAATCTTGTGACTCCCATGATCTATTTGCCCTGAAGGAATTCGCAGGAAACCTCACAAATGGGTCGATAATCAAATCGTGGTCTGATGACGTTGGTTGCTGCAAATGGGTTGGAGTTGTCTGTGAAAATGTGACTGATGGGACAGCTGCTAGTAGAGTGATCAAGTTGGTTCTGCCTCAAATGGGTCTCAAAGGGGTGATTTCGAACTCCCTAGCACAATTAGATCAGTTAATTGTGCTGGATCTTTCATTCAATCATTTCCAAGGTGGGTTGCCTGCAGAATTATCCAAGTTGAAGCTGTTGAAAACTCTTGATTTGAGCCATAATATGCTGTCGGGACCTGTTGCTGAAGGCCTTTCTGGTTTGCAATCCATTCAGATACTGAATATTTCTAGCAATTCATTTGTTGGAAATTTCTCTCAGCTTGGCGAATTCCCACATCTCCTTGCATTCAACTTAAGCAACAATTCATTCAGCGGTCAGTTCAATTCTAAAATTTGCAGTTTCCCCATGGGGCTTCATATGCTTGATTTATCTGCAAATCGTCTTGCTGGTGGTCTTGATGACTTGGACAATTGTAGTACATCTCTCCAGGAGTTGCATTTGGATGACAATATGTTTTCAGGCCCTCTTCCAGATTCCTTGTACTCATTGTCATCCTTGGAGCAGCTCTCAGCGTCTGTGAACAATTTCTCTGGCCAGTTAAGCAAGAAGCTCAGTAAGCTCTCTAGCTTAAAGTCCTTGATAATTTATGGGAATCATTTTTCTGGGGAACTCCCTAATGTGTTCTGGAATCTTTCACGTTTAGAACAATTAACAGCACACTCCAATTCTTTTTCTGGGCCATTGCCTTCTACCTTGGCTTTATGCTCAAAGCTTCGAGTGCTTGATCTTCGAAATAATTCTCTGGCTGGTCCTCTGGATCTTAATTTTTCTGGGTTGCCTAATCTGTGTACACTTGATCTTGCCACTAATCATCTTACTGGACCCCTTCCAAGCTCCTTGTCTTATTGCCGCGAACTGAAAGTTTTGAGCCTTGCTAAAAATGGGTTAACTGGTTCAATCCCGGAAAACTATGCGAATCTTTCTTCGCTTTTGTTTCTTTCCTTATCAAACAACAGTGTAGAGAACTTATCTGGGGCGCTGTCTGTGCTTCAGAATTGCAAAAACCTCACCACTCTTATCCTCACAAAGAATTTCCATGGTGAGAAATTACCAGAGAGTGTTGGAGGCTTTGACAGCCTTATGGTATTGGGACTTGGAAATTGTGGTCTGAAAGGCCAAGTCCCTGCTTGGCTTTTGAATTGCAGCAAATTGGCAGTTCTTGATTTGTCTTGGAACCATTTGGAAGGTAGTATCCCTTCCTGGATTGGTAGGATGGACAATTTGTTCTACTTGGATTTCTCAAACAATTCTTTCATGGGAGAAATACCGAAAAGTTTGACAGAGCTAAAGGGCCTCATATCCACAAATTGCAGTAGATCAAACCCTGCTGCATCGGCTGGCGTTCCTCTTTATGTGAAGAGAAACAAGAGTGCCAACGGGCTGCAATATAACCAGGCCTCAAGTTTCCCCCCTTCAATATACTTGAGCAATAACAAATTAAGTGGGATAATATGGCCTGAAATTGGGCGACTGAAAGCACTGCATGTCTTGGATTTAAGCAGAAATAACATCTCTGGTAAAATTCCTAGCTCCATTTCAGAGATGGAGAACTTGGAAACATTAGATCTGTCATATAATGATCTCTATGGAATGATCCCTCCATCATTTAACAACCTCACGTTCTTGTCAAAGTTCAGTGTGGCATATAATCACTTGCAGGGACCGATTCCAACAGGGGGACAGTTTCTAAGCTTTTCTAGTTCAAGCTTTGAGGGCAACCTGGGACTCTGTAGGGAAATAGATTCTCCTTGCAAAATGATCAACAATATGGGATTGAGGCCCAATATTGCTTCTGGTTCTTCCAGCAAGTTTGGTAGAAACAATGTTCTTGGCATAACAATTAGTATAGGTGTAGGGCTTGCACTGCTTCTTGCTATTATTCTGCTAAAAATATCAAAGAGGGATGAAGAGAAGCCGGTTGAGATCTTTGATGAGGAAGTCAGCAGGTCACAGACGTTATCTGAAGCACTTGTTTCTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGTAAGGATCTCACAGTTGCAGAATTGTTAAAATCCACAAACAATTTCAACCAGGCAAACATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCCAATCTTCCAAATGGTACAAAAGCCGCGATCAAGAGACTTTCTGGGGACTGTGGTCAGATGGAACGAGAATTCCAAGCCGAAGTAGAGGCCCTTTCAAGAGCTCAGCACAAGAACCTTGTTTCTCTTAAAGGTTATTGCCGGTATGGCAACGACAGATTGTTAATTTACTCCTACTTGGAGAATGGAAGCTTGGATTATTGGCTGCATGAGTGTGTGGATGCTAATTCAGCTCTGAAATGGGATGTGAGGCTCAAGATTGCAAAAGGTGCTGCTCATGGATTAGCCTACTTGCACAAGGGATGTGAGCCGTTCATAGTTCATCGAGATGTTAAATCAAGCAACATACTTCTGGATGACAAATTCGAAGCTCATTTGGCTGATTTTGGCCTTTCAAGGCTACTTCAGCCTTATGACACCCATGTCACCACAGATTTAGTAGGGACCCTAGGATACATTCCTCCAGAATATAGTCAGACACTAACAGCAACCTTCAGGGGCGATGTCTATAGCTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGGTAGAAGGCCTGTAGAAGTCATCAAGGGGAAAAACTGCAGGAACCTGGTGTCTTGGGTTTTTCAGATGAAATCTGAAAACAAGGAGCAAGAAATTTTCGATTCAGCCATTTGGGACAAGGATCATGAGAAGCAACTCTTGGAGGTATTGGCCATTGCTTGTAGATGCCTAGACCAGGATCCAAGGCAGAGACCCTCCATTGAAGAAGTTGTTTCATCACTTGATCGGGTAGGATTTGATGGATTTCAACAATGA 3159 0.4261 MLLRRYFWRAFLQWGFLTCFLCLSLGLKTPTQSCDSHDLFALKEFAGNLTNGSIIKSWSDDVGCCKWVGVVCENVTDGTAASRVIKLVLPQMGLKGVISNSLAQLDQLIVLDLSFNHFQGGLPAELSKLKLLKTLDLSHNMLSGPVAEGLSGLQSIQILNISSNSFVGNFSQLGEFPHLLAFNLSNNSFSGQFNSKICSFPMGLHMLDLSANRLAGGLDDLDNCSTSLQELHLDDNMFSGPLPDSLYSLSSLEQLSASVNNFSGQLSKKLSKLSSLKSLIIYGNHFSGELPNVFWNLSRLEQLTAHSNSFSGPLPSTLALCSKLRVLDLRNNSLAGPLDLNFSGLPNLCTLDLATNHLTGPLPSSLSYCRELKVLSLAKNGLTGSIPENYANLSSLLFLSLSNNSVENLSGALSVLQNCKNLTTLILTKNFHGEKLPESVGGFDSLMVLGLGNCGLKGQVPAWLLNCSKLAVLDLSWNHLEGSIPSWIGRMDNLFYLDFSNNSFMGEIPKSLTELKGLISTNCSRSNPAASAGVPLYVKRNKSANGLQYNQASSFPPSIYLSNNKLSGIIWPEIGRLKALHVLDLSRNNISGKIPSSISEMENLETLDLSYNDLYGMIPPSFNNLTFLSKFSVAYNHLQGPIPTGGQFLSFSSSSFEGNLGLCREIDSPCKMINNMGLRPNIASGSSSKFGRNNVLGITISIGVGLALLLAIILLKISKRDEEKPVEIFDEEVSRSQTLSEALVSSKLVLFQNSDCKDLTVAELLKSTNNFNQANIIGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRYGNDRLLIYSYLENGSLDYWLHECVDANSALKWDVRLKIAKGAAHGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLSRLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTGRRPVEVIKGKNCRNLVSWVFQMKSENKEQEIFDSAIWDKDHEKQLLEVLAIACRCLDQDPRQRPSIEEVVSSLDRVGFDGFQQ 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2942 1052 SMART LRR_typ_2 467 491 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 393 416 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 105 129 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 601 624 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 577 600 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 345 369 IPR003591 -
Bisa02g2942 1052 SMART LRR_typ_2 273 296 IPR003591 -
Bisa02g2942 1052 Pfam Protein kinase domain 772 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2942 1052 PRINTS Leucine-rich repeat signature 601 614 - -
Bisa02g2942 1052 PRINTS Leucine-rich repeat signature 132 145 - -
Bisa02g2942 1052 SUPERFAMILY L domain-like 261 658 - -
Bisa02g2942 1052 SMART LRR_sd22_2 393 411 - -
Bisa02g2942 1052 SMART LRR_sd22_2 129 152 - -
Bisa02g2942 1052 SMART LRR_sd22_2 577 606 - -
Bisa02g2942 1052 SMART LRR_sd22_2 321 347 - -
Bisa02g2942 1052 Gene3D Transferase(Phosphotransferase) domain 1 847 1046 - -
Bisa02g2942 1052 FunFam Tyrosine-sulfated glycopeptide receptor 1 342 675 - -
Bisa02g2942 1052 Gene3D Phosphorylase Kinase; domain 1 732 846 - -
Bisa02g2942 1052 Gene3D Ribonuclease Inhibitor 369 674 IPR032675 -
Bisa02g2942 1052 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Bisa02g2942 1052 FunFam Leucine-rich repeat receptor-like protein kinase 847 1051 - -
Bisa02g2942 1052 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Bisa02g2942 1052 CDD STKc_IRAK 777 1044 - -
Bisa02g2942 1052 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Bisa02g2942 1052 SMART serkin_6 771 1045 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2942 1052 Gene3D Ribonuclease Inhibitor 36 155 IPR032675 -
Bisa02g2942 1052 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 87 218 - -
Bisa02g2942 1052 FunFam Phytosulfokine receptor 1 734 846 - -
Bisa02g2942 1052 SUPERFAMILY Protein kinase-like (PK-like) 753 1042 IPR011009 -
Bisa02g2942 1052 Pfam Leucine rich repeat 323 382 IPR001611 GO:0005515
Bisa02g2942 1052 Pfam Leucine rich repeat 558 614 IPR001611 GO:0005515
Bisa02g2942 1052 Gene3D Ribonuclease Inhibitor 265 365 IPR032675 -
Bisa02g2942 1052 Gene3D Ribonuclease Inhibitor 169 264 IPR032675 -
Bisa02g2942 1052 SUPERFAMILY L domain-like 57 316 - -
Bisa02g2942 1052 ProSiteProfiles Protein kinase domain profile. 771 1047 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2942 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Bisa02g2942 1052 FunFam Leucine-rich repeat receptor-like kinase 38 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2942 Bisa-ChrBisa02 74496442 74499600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2942 270 693 Receptor kinase-like Gene Family AT1G55610 30.444 4.49e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa02g2942 Pkinase 1e-44 CL0016