Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2941 ATGGAGGCCAAAAGTATTGAGAGGAAGAGAACTTCAGTTGAGAAGGTAAGGAAAGATAATAAAATAGTTGAAGAAGAAGTAGATGATGAGGTAGAAGAGGAGGATGAGAGTGGCGGTGGCAGTGTTGCAGAAGAGGAGAAGAGGAAAGGGGTTGTGGGGAGTGGGAGAAGAGGGTCAGGTGGAGGAAGTGGTGGAGTTTCTCCACCTTCTTGTCAGGCAGAGAGGTGTGGAGCTGATCTGACCGAAGCAAAGCGGTACCATCGCCGCCATAAGGTGTGCGAGTTCCACTCCAAAGCGCCGGTTGTGATGGTTGCAGGGCTAAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACTTGGGGGAATTTGATGAAGCCAAGAGAAGCTGCCGGAGGCGCCTGGCCGGACACAACGAACGGCGCCGGAAAAGCCCCGCTGAGATTTACAATGATGGCTGCAGCCAAGGCAAAGGCCAGCACACAAAGGAAAGCCATTGCAGGCATTCTGATGACAGAGGCAGAGTTCAGATGAGCATTTCTGGGAGCTCTGGCTACAAACCTTTCCACATCAAATGA 579 0.5181 MEAKSIERKRTSVEKVRKDNKIVEEEVDDEVEEEDESGGGSVAEEEKRKGVVGSGRRGSGGGSGGVSPPSCQAERCGADLTEAKRYHRRHKVCEFHSKAPVVMVAGLRQRFCQQCSRFHDLGEFDEAKRSCRRRLAGHNERRRKSPAEIYNDGCSQGKGQHTKESHCRHSDDRGRVQMSISGSSGYKPFHIK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2941 192 FunFam Squamosa promoter-binding-like protein 14 63 132 - -
Bisa02g2941 192 MobiDBLite consensus disorder prediction 1 73 - -
Bisa02g2941 192 MobiDBLite consensus disorder prediction 1 24 - -
Bisa02g2941 192 Coils Coil 6 33 - -
Bisa02g2941 192 MobiDBLite consensus disorder prediction 25 40 - -
Bisa02g2941 192 SUPERFAMILY SBT domain 69 149 IPR036893 GO:0003677|GO:0005634
Bisa02g2941 192 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 47 155 IPR044817 GO:0003677
Bisa02g2941 192 Pfam SBP domain 71 144 IPR004333 GO:0003677
Bisa02g2941 192 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Bisa02g2941 192 Gene3D - 61 132 IPR036893 GO:0003677|GO:0005634
Bisa02g2941 192 MobiDBLite consensus disorder prediction 159 175 - -
Bisa02g2941 192 MobiDBLite consensus disorder prediction 136 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2941 Bisa-ChrBisa02 74456166 74457229 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2941 6 188 SBP-box Gene Family AT3G15270 45.405 4.25e-43 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa02g2941 SBP 1.1e-31 No_clan