Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2938 ATGAGTGATGCAGCAGGGTTAGCTGAGGCAGCAGGGTCAAGGTTTTATTCCTTGGAGCTAATTGGACAAGGGTCATTTGGCGATGTCTATAAAGCATTTGACAAGGAGCTCAACAAAGTAGTTGCTATCAAAGTGATCGATTTGGAAGAATCAGAAGAAGAGATTGATGACATTCAGAGGGAAATTTCTGTTCTATCACAATGTCGATGTCCATATATTACTGATTATTATGGCTCTTACCTCCATCAAACTAAACTTTGGATAATAATGGAGTACATGGCTGGAGGCTCTGTTGCTGACCTACTCCAATCAGGTAATCCCCTTGATGAAGTGTCGATTGCTTGCATTTTACGTGACATACTACAAGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATCAAAGCGGCAAACATTTTATTAAGTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGTGTTTCTGCACAGTTAACTAGGACCATATCGAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGAATTCAGACGGTTATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAGCAATTGAAATGGCAAAAGGGGAGCCTCCACTCGCAGACCTTCACCCTATGAGAGTGCTTTTTATCATACCTCGGGAGAACCCACCACAGCTTGATGAGCATTTTTCTCGGCCTATTAAAGAATTTGTTTCCTTGTGTTTAAGGAAGCTTCCAGCTGAGGCAAGTGCCTTATTCACTTTTACTACTAGGCCAAGTGCTAAGGAACTTCTCAAACACCGTTTTATTCGGACTGCTAGGAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGATCGACCCAAGTATCAAATAAAGGAAGATGGGGGAACAATTAGAAATGATCCAAGAGGGATAGGGGAGGCATCTGATACAATGAAGGTTACAAGAGATTCAAGAGGTGAAGAAGCCACTCAAACCAATCCCAGTGGTCAGGATAAAACCTGGAAAAATTCTGGATGGGACTTCAGCATTGGTGGATCACAGGGTACTGGAACTCTTCGCGGTACTGCAGTTGCACGACCACCTCAGTTTAGAACTAAGAAAAACGATCCTTCACATAACCAGCTTGACCAAAAAAAAGCTCCAGAGAGTGGCTATCATGGGGCATCTTCCTTTAGAAGTGCTCATAATGAATTACCAGAAACTTCAATTGAAGATGATGACTTTTCTGGAACTGTTGTTGTTCGATCCTCAAAAGGATCACAGCCACCGCGGCTTCGTGACCAGAGCTCCAGGTCTAGCAGCAGCTATGCTTCTCTTGAAGATGCTTCAACCACTGGAACTGTTGTTGTCCGTGGTCAGCGTGATGATTATGACCCTCCACAAACACTGAGGTCCAGGCCAGGACTTAATGAGAGAACTTCAGATGCCTCACCTGAAGACAGTGCCACAAATCTTGCAGAGGTTCTCTATTTTATATAA 1500 0.43 MSDAAGLAEAAGSRFYSLELIGQGSFGDVYKAFDKELNKVVAIKVIDLEESEEEIDDIQREISVLSQCRCPYITDYYGSYLHQTKLWIIMEYMAGGSVADLLQSGNPLDEVSIACILRDILQAIDYLHTEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLRKLPAEASALFTFTTRPSAKELLKHRFIRTARKSPKLLERIRDRPKYQIKEDGGTIRNDPRGIGEASDTMKVTRDSRGEEATQTNPSGQDKTWKNSGWDFSIGGSQGTGTLRGTAVARPPQFRTKKNDPSHNQLDQKKAPESGYHGASSFRSAHNELPETSIEDDDFSGTVVVRSSKGSQPPRLRDQSSRSSSSYASLEDASTTGTVVVRGQRDDYDPPQTLRSRPGLNERTSDASPEDSATNLAEVLYFI 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2938 499 Pfam Protein kinase domain 18 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2938 499 SUPERFAMILY Protein kinase-like (PK-like) 12 314 IPR011009 -
Bisa02g2938 499 ProSiteProfiles Protein kinase domain profile. 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2938 499 MobiDBLite consensus disorder prediction 420 457 - -
Bisa02g2938 499 CDD STKc_MST3_like 13 296 - -
Bisa02g2938 499 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 11 437 - -
Bisa02g2938 499 MobiDBLite consensus disorder prediction 327 360 - -
Bisa02g2938 499 SMART serkin_6 15 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2938 499 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Bisa02g2938 499 Coils Coil 41 68 - -
Bisa02g2938 499 FunFam serine/threonine-protein kinase dst1 isoform X1 12 309 - -
Bisa02g2938 499 MobiDBLite consensus disorder prediction 473 488 - -
Bisa02g2938 499 MobiDBLite consensus disorder prediction 296 490 - -
Bisa02g2938 499 Gene3D Transferase(Phosphotransferase) domain 1 12 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2938 Bisa-ChrBisa02 74349461 74357547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2938 1 495 MAP Kinase Kinase Kinase Kinase AT3G15220 66.990 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Bisa02g2938 Pkinase 2.3e-64 CL0016