Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2929 ATGGAAAGCTACTACCACTTTGATAATAGTGACGCCCGTTTGCCTCCTGGTTTTCGGTTCCACCCCACAGACGAGGAGCTCATCACATACTACCTGCTTAAGAAGGTCCTTGACAATAACTTCACAGGTAGAGCCATTGCTGAAGTTGACCTCAACAAGTGCGAGCCATGGGAACTTCCAGAGAAAGCGAAGATGGGAGAGAAGGAGTGGTACTTTTTCAGCCTGCGAGATAGAAAGTATCCCACTGGGCTGCGAACCAATAGGGCTACAGAAGCTGGATACTGGAAGGCCACTGGGAAAGACAGAGAAATCTATAGCTCCAAGACTTGCTGTCTCGTGGGTATGAAGAAGACCCTTGTTTTCTACAGAGGCAGAGCTCCCAAGGGAGAGAAGAGCAACTGGGTCATGCATGAGTATCGCCTTGAAGGAAAATTTGCCTACCATTACCTCTCTCGCACCTCCAAGGATGAGTGGGTCATATCCCGAGTGTTCCAGAAGAATAGTTCCGGCAACGGCGGATCCGCTACCATATCCTCCTCCTGCAGCGGCGCCGGCGGCTCTAAGAAGACACGGAACATTATGAGCTCTTCGTCAAACTTGAGCCTCTACCCAGAGCCCAGTTCTCCCTCCTCTGTCTACCTCCCGCCTCTGCTCGACTCCACTCCCTTCTCAGCCGCCACCAGCAGCACCGGTGCATCCGCCGCCGTCAACGACCGTGACAGTTGCTCCAACACTTACGACAGCAACACCGCAAGAGAGCACGTGTCCTGTTTCTCCACAATCTCTGCTCCCACCACCACCACCACCACCACTACCAACAACAGTTACAACTACAACTTCCCCAATGGCGGCTTCGACTTCTCTGTTGCCGCGTCTCCGTCTCTCACGGCTGACCCGTTCGCTCGATTCCAGAGGAACGGCGGCGTTTCGGCCTTCCCCAGCCTGAGGTCGCTGCAAGACAACCTTCAGCTGCCTTTCTTTTTCCCGCAGCAGCCGTTTCCCGGCGTCCCGGTCGACATGAACGGATGTGGCGGCACTGTTGGCAACTGGGTGGCGCCGGCGGAGGAGCAGAAGTTGGCGGACGGCGGTTCCGGCATGGTGGCGTTGGGTGGCTCCGAGCTTGATTGCATGTGGGGCTTCTAA 1143 0.5547 MESYYHFDNSDARLPPGFRFHPTDEELITYYLLKKVLDNNFTGRAIAEVDLNKCEPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCCLVGMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRTSKDEWVISRVFQKNSSGNGGSATISSSCSGAGGSKKTRNIMSSSSNLSLYPEPSSPSSVYLPPLLDSTPFSAATSSTGASAAVNDRDSCSNTYDSNTAREHVSCFSTISAPTTTTTTTTNNSYNYNFPNGGFDFSVAASPSLTADPFARFQRNGGVSAFPSLRSLQDNLQLPFFFPQQPFPGVPVDMNGCGGTVGNWVAPAEEQKLADGGSGMVALGGSELDCMWGF 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2929 380 FunFam NAC domain-containing protein 100-like 23 170 - -
Bisa02g2929 380 ProSiteProfiles NAC domain profile. 14 166 IPR003441 GO:0003677|GO:0006355
Bisa02g2929 380 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Bisa02g2929 380 SUPERFAMILY NAC domain 11 166 IPR036093 GO:0003677|GO:0006355
Bisa02g2929 380 MobiDBLite consensus disorder prediction 167 192 - -
Bisa02g2929 380 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 247 - -
Bisa02g2929 380 Gene3D NAC domain 23 170 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2929 Bisa-ChrBisa02 74206132 74207974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2929 4 380 NAC Transcription Factor Family AT5G53950 56.061 1.09e-119 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g2929 NAM 5.7e-41 No_clan