Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2912 ATGAAGGCCGTGGCCGCCATTGTTGAGTCCTGGGAATGGTACCAAGTCAACATCATCTACGAAGACACACCCTCACTCTCCTCAGGAGTCCTCCCTCATCTCTCCACAGCCCTTAGGGAAGCCGACATTGGCATCAGCAACCTCGTACCTGTCCCTCCTTTTGTGTCCCCTTCGCTGTACGAGGAGCTCCAGAGGCTGAGAGAAGGACAGTGTAAGGTGTTTGTGGTTCATGTGTCGTTCTCTTCGGCGATTCAGTTGTTTGAAGCTGCTCAGAAGTTGAAGATGATGGAGAAGGAGTATGTGTGGATTGTTACTGATCCATTCACTAGTGTGGTTCATTCCTTGAATGCTTCCACTCTGTCTCTGATGCAAGGGGTTATTGGAGTTAGGAGCTACTTTTCACAAGTGGGCCATCGGTATGAGGATTTTTACTTTCGATTTCGTCACAAATATAGCTCTGACCACCCTAGGGAGTTTGATAATGAGCCCGGAGTTTTTGCAGCTCAGGCCTATGATGCTGCATGGACACTGGCTCTAGCAATGAGGGAAAGCAACAACACAGGGGGCCAGATTCTTCTAGACAAGATTCTGCTCAGTAATTTTTCTGGTTTAAGTGGGAAAATTCAGTTCACTGATCATAGATTATCTCCTGCAAACACTTTTCAAATCATCAATGTGATGGGGAAGCAGTATGTTGAACTTGGGTTCTGGTCTGAAGGACGAAACTTCTCAAGAACTATTGGCCTAAAAGCTACTTACAACTCATCAATGAAGGTTCTGGGACCAGTGTTCTGGCCAGGAGGACCTTGGGATACTACCCCAAGAGGATGGACCCTACCAACAATTGACAAGCCACTAAGAATTGGAGTCCCCTCCCGGTCCTTAATGAAACAGTTTGTAAACATAGTCCAAGACGATGATTCTAATATTACTTCATTCCATGGATTCTCTATAAATCTTTTCAAAGCAACTGTAGAGCTCTTGCCTTACCATTTACCCTACCAATTCTATGCTTCCAATGACACATATGATAATCTAATCAAGCAGATTTATTACAAGAATTTTGATGCAGTTGTTGGTGATGTGACGATAGTGTCGTATCGGTATGAATATGCAGATTTCACTCAGCCCTATACTGATCCAGGAATTTCGATGATAGTTCCTATTAAAGAAAAAGGAGGACAAAGAGCTTGGCTATTCATGAAGCCTTTTACAAAGACCATGTGGGTTCTGATAGTGGTGATGGTCATCTACAATGGTTTTGTTCTGTGGATGTTGGAAAGAAACCATCGCCCCAAGCTTAAGGACTCTGTGTTGAACCAAACTGGAACCATGTGCTGGGTTTCTTTCACAACTCTCATCTCCTTACATGGGGATAGGTTGCATAGCAATTTGTCAAGGATGACTATGGTAGTGTGGTTGTTTGTGGCACTGATCATCACACAGACATACACAGCCAACCTTGCCAGCATGCTAACTGTTGAGAAGCTTGAACCTACGGTGGATAATGTTGATCAGCTAAGAAATAGAAATGCCATTGTTGGATATGAAAGATCCTTCTTCATGAAAAAGTATCTGCATGATGTTCTACACTTCCATCCCTCAAACACTAGGCCGTTCAGTTCTGCAGAAGAATATGCTGAACCCCTCAGAAGCAAACAGATTGCAGCAGCTTTTCTTGAGGCCCCTTTTGCCAAACTCTTCCTTGCAAAGTACTGTAACGAGTTCATTCATGTTGGGCCTACATACAAAACTGGAGGATTTGCCTTTGTAATGCTTCCACACTTCCTCTTACGTGATTATGCAATTGAGAACGGCAAGCTACTGGATTTGGAAAACGAAATGCTTGCATCACAGAAATGTGAAGACACAGATTCAGATGAAGAAAACATAAGCCTTAGCCCTACAAGCTTCTGGGTACTCTTCACATTGACGGGAGGCACATCAACAATTGCTCTCTTGCTCTACATGTTTCGTAAGGATGATTCAAACAGTGGACAAAGAAGATTGTGGAGATTAATGATGGCGGTTGTTCAACTCTGGGGATCTCCAAGGAGACAATTCTTGAGAAGAGTCAGTGACGTTGCAGAAAGCCCCATGAGCTCTCCAAATACACCCACTTTGCCAACTCATGTCTAA 2139 0.4381 MKAVAAIVESWEWYQVNIIYEDTPSLSSGVLPHLSTALREADIGISNLVPVPPFVSPSLYEELQRLREGQCKVFVVHVSFSSAIQLFEAAQKLKMMEKEYVWIVTDPFTSVVHSLNASTLSLMQGVIGVRSYFSQVGHRYEDFYFRFRHKYSSDHPREFDNEPGVFAAQAYDAAWTLALAMRESNNTGGQILLDKILLSNFSGLSGKIQFTDHRLSPANTFQIINVMGKQYVELGFWSEGRNFSRTIGLKATYNSSMKVLGPVFWPGGPWDTTPRGWTLPTIDKPLRIGVPSRSLMKQFVNIVQDDDSNITSFHGFSINLFKATVELLPYHLPYQFYASNDTYDNLIKQIYYKNFDAVVGDVTIVSYRYEYADFTQPYTDPGISMIVPIKEKGGQRAWLFMKPFTKTMWVLIVVMVIYNGFVLWMLERNHRPKLKDSVLNQTGTMCWVSFTTLISLHGDRLHSNLSRMTMVVWLFVALIITQTYTANLASMLTVEKLEPTVDNVDQLRNRNAIVGYERSFFMKKYLHDVLHFHPSNTRPFSSAEEYAEPLRSKQIAAAFLEAPFAKLFLAKYCNEFIHVGPTYKTGGFAFVMLPHFLLRDYAIENGKLLDLENEMLASQKCEDTDSDEENISLSPTSFWVLFTLTGGTSTIALLLYMFRKDDSNSGQRRLWRLMMAVVQLWGSPRRQFLRRVSDVAESPMSSPNTPTLPTHV 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2912 712 SUPERFAMILY Periplasmic binding protein-like I 2 277 IPR028082 -
Bisa02g2912 712 Gene3D - 169 284 - -
Bisa02g2912 712 FunFam Glutamate receptor 397 535 - -
Bisa02g2912 712 Gene3D - 285 398 - -
Bisa02g2912 712 Pfam Receptor family ligand binding region 1 226 IPR001828 -
Bisa02g2912 712 SUPERFAMILY Periplasmic binding protein-like II 273 592 - -
Bisa02g2912 712 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 9 659 IPR015683 -
Bisa02g2912 712 CDD GluR_Plant 284 616 - -
Bisa02g2912 712 Gene3D - 399 528 - -
Bisa02g2912 712 SMART GluR_14 287 618 IPR001320 GO:0015276|GO:0016020
Bisa02g2912 712 Pfam Ligand-gated ion channel 592 647 IPR001320 GO:0015276|GO:0016020
Bisa02g2912 712 FunFam Glutamate receptor 1 161 - -
Bisa02g2912 712 Pfam Bacterial extracellular solute-binding proteins, family 3 313 591 IPR001638 -
Bisa02g2912 712 FunFam Glutamate receptor 281 396 - -
Bisa02g2912 712 Gene3D - 1 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2912 Bisa-ChrBisa02 73839155 73848337 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2912 1 679 Ion Channels AT2G29110 33.380 1.71e-116 371