Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2908 ATGAGGACTGTAGCCGCCATTATTGAGTCTTGGGAATGGTACCAAGTGAACATCATCTACAAGGACACACCCTTACTCTCCTCAGGAGTCCTCCCTCATCTCTCCATAGCCTTTAGGGATGCCGACATGGGCATCAGCAACCTTGTACTTGTCCCTCCTTTTATGTCTTCTTTGCTGTACGAAGAATTCCAAAGGCTGAGAGAAGGGCAGTGTAGGGTGTTTGTGGTTCATGTGTCATTATCTTTAGTGATTCAGTTGTTTGAAGCTGCTCAGAGATTGAAGATGATGGAGAAGGAGTATGTGTGGATTGTTACTGATCCATTCACTAGCATTGTTCATTTCTTGAATGCTTCAACTCTGTCTTTGATGCAAGGGGTTATTATAGTTAGGAGTTACTTTTCACAAGTGGGGCATCAGAATAAGGATTTTTACCTTCGATTTCGTCATAAATATAGCTCTAATCACTCTAGGGAGTTTGATAATGAGCCTGGAGTTTTTACAGCTCAGATCATCAATGTGATGAAGAGGAAGTATGTTGAACTTGGGTTCTGGTCTAAAGGATTGAACTTCTCAAGAACTATTAGCCCAAATGCTACTTACAACTTATCAATGAAGTTTCTGGGACCAGTGTTCTGGCCAGGAGGACCTTTGGATACCCCAAGAAGATGGACCCTACCAACAAATGACAAGCCATTAAGAATTGGAATGCCTTACCATTTGCAATACCAGTTCTTTGCATTCAATGACAAATATGATAATTTGGTCAAGCAAATTCATTACAAGAGTTTTGATGCAGTTGTTTGTGAAGTGATGATAGTGTCATATCGGTATGAATATACAAATTTCACTCAGCCTTATATTGATCCAGGAATTATGATGATAGTTCCTACATATACAACTAACCTTGCCAGCATGCTAACTGTGGAGAAGCTTGAACCTATAGTGGATAATGTTGATCAGCTAAGAAAGAGCAATGCCATTGTTGGATATGATAGAGGATCCTTCATGAAAGACTATCTGCATGACGTCCAACACTTCCATCCCATAAAAACTAGGCAGTTCAATTCTACAGAAGAATATGCTGAAGCCCTCAAAACTGGTCCTATGTACAAAATTGGAGGATTTGCCTTTGTAATGCTTCCTACTTACTCTTACATGATTGCATATTTCATTTCCAAGGAAATCACAAATTCTTCCTACTGTGAACAAAGCCCTGATACAAAAACTGAGAATGGCAAGCTACTTGATTTGGAAAATGAAATGCTAGCATCACAGAGATGTGAAGACAAAGATTCAGATGAAGAAAACATAAGCCTTAGCCCTACTAGTTTCTGGGTTCTCTTCACATTGACTGGAAGCACATCAACAATTGCTCCTTGCTCTACATGTTTTGTAACAATAATTCAAACAGTGGACAAAGAAGATTGTGGAGATTAA 1437 0.3939 MRTVAAIIESWEWYQVNIIYKDTPLLSSGVLPHLSIAFRDADMGISNLVLVPPFMSSLLYEEFQRLREGQCRVFVVHVSLSLVIQLFEAAQRLKMMEKEYVWIVTDPFTSIVHFLNASTLSLMQGVIIVRSYFSQVGHQNKDFYLRFRHKYSSNHSREFDNEPGVFTAQIINVMKRKYVELGFWSKGLNFSRTISPNATYNLSMKFLGPVFWPGGPLDTPRRWTLPTNDKPLRIGMPYHLQYQFFAFNDKYDNLVKQIHYKSFDAVVCEVMIVSYRYEYTNFTQPYIDPGIMMIVPTYTTNLASMLTVEKLEPIVDNVDQLRKSNAIVGYDRGSFMKDYLHDVQHFHPIKTRQFNSTEEYAEALKTGPMYKIGGFAFVMLPTYSYMIAYFISKEITNSSYCEQSPDTKTENGKLLDLENEMLASQRCEDKDSDEENISLSPTSFWVLFTLTGSTSTIAPCSTCFVTIIQTVDKEDCGD 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2908 478 Gene3D - 1 233 - -
Bisa02g2908 478 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 297 462 IPR015683 -
Bisa02g2908 478 SUPERFAMILY Periplasmic binding protein-like I 2 222 IPR028082 -
Bisa02g2908 478 Pfam Receptor family ligand binding region 2 145 IPR001828 -
Bisa02g2908 478 SUPERFAMILY Periplasmic binding protein-like II 206 369 - -
Bisa02g2908 478 SMART GluR_14 167 424 IPR001320 GO:0015276|GO:0016020
Bisa02g2908 478 Pfam Bacterial extracellular solute-binding proteins, family 3 244 367 IPR001638 -
Bisa02g2908 478 FunFam Glutamate receptor 1 161 - -
Bisa02g2908 478 Pfam Ligand-gated ion channel 368 452 IPR001320 GO:0015276|GO:0016020
Bisa02g2908 478 Gene3D - 234 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2908 Bisa-ChrBisa02 73775490 73778489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2908 297 478 Ion Channels AT2G29100 26.291 1.84e-08 55.1