Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2906 ATGGGAAACATGCATAGGCATAGGCTTGTTCCTCCACTTTGCTTGATGATGATGGCTGTGATAAGAACTGTTCTGGGAAGTGCAGGAACAAACCATGAGGATGCTCCAATACTAATAATTGGAGCCATAACAGATAACAGTTCTCGAATAGGTAAAGAGCAGAGTGTGGCTATGAAGATGGCGTTGGAGGACTTCTTTCTCCATACCAATCAAAGCTTCCTTCTCCACATAAGGGACTCTCATGGAGATCCTCATCGAGCTGCTCTTGCAGCAAGAGATCTTATTAAGAAGCAGAAGGTGCAAGTCATCATAGGACCACAAACATGGGAACAAACATCCTCGGTGACTGACATCTGCTGTGAAAACAACATACCCCTTCTGTCTCTGGCCAACGCCATTCCAAGCTGGGCCACAAAGAAATGGGACTTCCTTCTTCAAGCCTTGCCTTCCCATTTCTCACACATGAGGACTGTGGCCGCCATTGTTGAGTCTTGGGAATGGTACCAAGTCAACATCATCTACGAGGACACACTCTCCTTCTCCTCAGGAGTCCTCCCTCATCTCTCCACAGCCCTTAGGGAAGCGGATGTTGGCATCAGCAACCTCTTGTTTGAAGCTGCTAAGAAATTGAAGATGATGGACATTGAGTATGTGTGGATTGTTACTGATCCATTCACTAGTGTGGTTCATTCCTTGAATGCTTCCACTTTGTCTTTGATGCAAGGAGTTATTGGAGTTAGGAGCTACTTTTCACAAGTGAGCCATCAGTATGAGGATTTTTACCTTCGATTTCGTCACAAATATAGCTCTGACCACCCTACGGAGTTTGATAATGAGCCCGGAGTTTTTGCAGCTCAGGCCTACGATGCTGCATGGTCACTGGCTCTAGCAATGAGGGAAAGCAACAACACGGGGGGCCAAATTCTACTAGATAAGATCCTGCTTAATAATTATTTTGGTTTAAGTGGGAAAATCCAATTCACCGATCATAGATTAGCTGCTGCAAATACATTTCAGATCATCAATGTGATAGGGAAGAAGTATGTGGAACTTGGGTTCTGGTGTGAAAGACTGAAATTCTCAAGAACCGTTGGCCCAAACGCTGCTTACAACTCATCAATGAAGGCTTTGGGACCAGTGTTCTGGCCAGGAGGACCTTGGGATGCCCCAAGAGGATGGAGCCTACCAACAAATGACAAGCCACTAAGAATTGGAGTCCCTACCCAGTCCACAATAAAACACTTCGTAAAAATAATCCGCGATGATTCTAATAATATTACTTCATTCCGTGGCTTCTCTATAGATCTTTTCAGAGCAACTGTAGAGCTCTTGCCTTACCATTTGCCATACCAGTTCTTTGCTTTCAATGGCACATATGATAATTTGGTCAAGGAAATTCATTACAAGAATTTTGATGCAGTGGTTGGTGAGGTGACGATAGTATCATATCGATATGAATATGCAGATTTCACTCAGCCCTATACTGATCCAGGAATTGTGATGATAGTTCCTGTTAAAGAAAAAGGAGGACAAAGAGCTTGGTTGTTCATGAAGCCTTTTACAAAGACCATGTGGGTTCTGATAGTGGTGATGGTCATCTACAATGGATTTGTTCTATGGATTTTGGAAAGAAACCATTTCCCTGAGGTTAATAACTCTGTATTGAATCAAACTGTGACCATGTTTTGGTTGTCATTTACCACTCTCATCTCCTTACATGGGGATAAGTTACATAGCAACTTGTCAAGGATGACTGTGGTAGTGTGGTTGTTTGTGGCACTAATCATCACACAGACATACACAGCTAACCTTGCCAGCATGCTGACTGCTGAGAAGCTTGAACCTACGGTGGATAATGTTGATCAGCTAAGAAATAGTAATTCCATTGTTGGATATGACAGAGGATCCTTCATGAAAAACTATATGCATGATGTTCTACACTTCCATCCCACAAACACTAGGAAGTTCAATTCTGAAGAAGAATATGCTAAAGCCCTCATAAGCAAACATATTGCAGCTGCTTTTCTTGAGGCCCCTGGCGCCAAACTCTTCCTTGCAAAGTACTGTAAAGAGTTCATTCAAGTTGGCCCTATGTACAAAATTGGAGGATTTGCCTTTGTAATGCTTCCACACTTCCTCTTACGTGATTATGCATTTCCAAGGAAATCACCATTGCTTCCTACTGTGAACAAAGCCCTGTTAAAGGTAATTGAGAACGGCAAGCTACTTGATTTGGAAAATGAAATGCTTGCTTCACAGCAATGTGAAGACACAGAGTCAGACGAAAAAAACATAAGCCTTAGCCCTACTAGCTTCTGGGTTCTCTTGACATTGACTGGAAGCACATCAACAATTGCTCTCTTGCTTTACATGTTTTGTAACAATCATTCAAACAGTGAATACAGAACATTATGGAGACTAATGATGGCCTTTGTTCAACACTGGGGATCTCTAAAGAGGCACTTCTTAAGAAGAGTCAGTGATGTTGCAGTTCTTATGAGCTCTCCACATGCACCTACTTTGCCAACTCATGTCTAA 2538 0.4255 MGNMHRHRLVPPLCLMMMAVIRTVLGSAGTNHEDAPILIIGAITDNSSRIGKEQSVAMKMALEDFFLHTNQSFLLHIRDSHGDPHRAALAARDLIKKQKVQVIIGPQTWEQTSSVTDICCENNIPLLSLANAIPSWATKKWDFLLQALPSHFSHMRTVAAIVESWEWYQVNIIYEDTLSFSSGVLPHLSTALREADVGISNLLFEAAKKLKMMDIEYVWIVTDPFTSVVHSLNASTLSLMQGVIGVRSYFSQVSHQYEDFYLRFRHKYSSDHPTEFDNEPGVFAAQAYDAAWSLALAMRESNNTGGQILLDKILLNNYFGLSGKIQFTDHRLAAANTFQIINVIGKKYVELGFWCERLKFSRTVGPNAAYNSSMKALGPVFWPGGPWDAPRGWSLPTNDKPLRIGVPTQSTIKHFVKIIRDDSNNITSFRGFSIDLFRATVELLPYHLPYQFFAFNGTYDNLVKEIHYKNFDAVVGEVTIVSYRYEYADFTQPYTDPGIVMIVPVKEKGGQRAWLFMKPFTKTMWVLIVVMVIYNGFVLWILERNHFPEVNNSVLNQTVTMFWLSFTTLISLHGDKLHSNLSRMTVVVWLFVALIITQTYTANLASMLTAEKLEPTVDNVDQLRNSNSIVGYDRGSFMKNYMHDVLHFHPTNTRKFNSEEEYAKALISKHIAAAFLEAPGAKLFLAKYCKEFIQVGPMYKIGGFAFVMLPHFLLRDYAFPRKSPLLPTVNKALLKVIENGKLLDLENEMLASQQCEDTESDEKNISLSPTSFWVLLTLTGSTSTIALLLYMFCNNHSNSEYRTLWRLMMAFVQHWGSLKRHFLRRVSDVAVLMSSPHAPTLPTHV 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2906 845 Pfam Ligand-gated ion channel 748 778 IPR001320 GO:0015276|GO:0016020
Bisa02g2906 845 Pfam Receptor family ligand binding region 56 199 IPR001828 -
Bisa02g2906 845 Pfam Receptor family ligand binding region 202 344 IPR001828 -
Bisa02g2906 845 Gene3D - 288 400 - -
Bisa02g2906 845 Gene3D - 401 514 - -
Bisa02g2906 845 Gene3D - 515 653 - -
Bisa02g2906 845 Gene3D - 200 275 - -
Bisa02g2906 845 FunFam Glutamate receptor 513 651 - -
Bisa02g2906 845 Pfam Bacterial extracellular solute-binding proteins, family 3 428 747 IPR001638 -
Bisa02g2906 845 CDD GluR_Plant 400 750 - -
Bisa02g2906 845 SMART GluR_14 403 752 IPR001320 GO:0015276|GO:0016020
Bisa02g2906 845 Gene3D - 35 195 - -
Bisa02g2906 845 CDD PBP1_GABAb_receptor_plant 40 362 IPR044440 -
Bisa02g2906 845 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 795 IPR015683 -
Bisa02g2906 845 FunFam Glutamate receptor 397 512 - -
Bisa02g2906 845 SUPERFAMILY Periplasmic binding protein-like I 36 393 IPR028082 -
Bisa02g2906 845 PIRSF IGluLR_plant 7 202 IPR017103 -
Bisa02g2906 845 PIRSF IGluLR_plant 198 825 IPR017103 -
Bisa02g2906 845 SUPERFAMILY Periplasmic binding protein-like II 376 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2906 Bisa-ChrBisa02 73698244 73706058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2906 40 843 Ion Channels AT2G29110 30.874 4.15e-129 408