Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2901 ATGGGAAACATGCGTAGGCATAGGCTTGTTCCTTCACTTTGCTTGATGATGATGACTGTGATAACTGTTCTGGGAAGTGCAGGAAGAAGCCATGAGGATGCTCCAGTAATAATAATTGGAGCCATAACAGATCACAGTTCTCGAATAGGTAAAGAGCAGAGTGTGGCTATGAAGATGGCGTTGGAGGACTTCTTTCAACACACCAATCAAAGCTTCCTTCTGCACATAAGGGATTCTCATGGAGATCCTCATCAAGCTGCTCTTGCAGCAAGAGATCTTATTAAGAAACAGAAGGTGCAAGTCATCATAGGACCACAAACATGGGAACAAACATCCTCAGTAACCGACATCTGCAGCGAAAACAACATACCCCTTCTGTCTCTGGCCAATGCCACAAAGAAATGGGACTTCCTTCTTCAAGCCTTACCCTCCCATTTCTCACACATGAGGACTGTGGCCGCCATTGTTGAGTCATGGGAATGGTACCAAGTCAACATTATCTACGAGGACACACCCTTTTTCTCCTCAGGAGTCCTCCCTCATCTCTCCACAGCCCTTAAGGAAGCCAACATTGGCATTAGCAACCTCGTACCTGTCCCTCCTTTTGTGTCCTCTTCGCTGTACGAGGAGCTCCAGAGGCTAAGAGAAGTGCAGTGTAGGGTGTTTGTGGTTCACGTGTCGTGCTCATTGGCGATTCAATTGTTTGAAGCTGCTCAAAGGTTGAAGATGATGGAGAAGGAGTATGTATGGATTGTTACTGATCCATTCACTAGTGTGGTTCATTCCTTGAATGTTTCCACTCTGTCTTCGATGCAAGGGGTTATTGGAGTTAGGAGCTACTTTTCACAAGTGGGGCATCGGTATGAGGATTTTTACCTTCGATTTCGTCACAAATATAGCTCTGACCACCCTAGGGAGTTTGATAATGAGCCCAGAGTTTTTGCAGCTCAGGCCTACGATGCTGCATGGTCTCTGGCTCTAGCAATGAGGGAAAGCAACAAGACAGGGGGCCAAATTCTATTAGATAAGATCCTACTTAGTAATTATTTTGGTCTAAGTGGGAAAATTCAATTCACCGATCATAGATTAGTTGCTGCAAATACATTTCAAATCATCAATGTGATAGGGAAGAAGTATGTGGAACTTGGGTTCTGGTCTGAAGGACTAAACTTCTCAAGAACTATTGGGCCAAATGCTGCTTACAACTCATCAATGAAGGTTCTTGGACCAGTGTTCTGGCCAGGAGGACCTTGGAATGCCCCAAGAGGATGGACCCTACCAACAAATGACAAGCCACTAAGAATCGGAGTTCCCACCCAGTCCACAATAAAACATTTCGTAAAAATAGTCCGCGATGATTCTAATAATATTACTTCATTCCATGGCTTCTCTATAGATCTTTTCAGAGCAACTGTAGAGCTCTTGCCTTACCATTTGCCATACCAGTTCTTTGCTTTCAATGACACATATGATAATTTGGTCAAGCAAATTCATTACAAGCTTAATAACTCTGTGTTGAATCAAACTGGGGCCATTGTTTGGTTGTCATTTACCACTCTTATCTCCTTACATGGGGTTAAGTTACATAGCAATTTGTCCAGGATGGTTATGATAGTGTGGTTGTTTGTGGCACTAATCATTACACAGACATACATAATTAACCTTGCCAACCTGCTGACAGTGGAGAAGCTTGAACCTACGGTAAATAATGTTGATCAGCTAAGAAAGAGCAATGCCATTGTTGGATATGATAGAGGATCCTTCATGAAAAACTATATGCATGATGTCCTACACTTCCATCCTACAAACACTAGGCAGTTCAATTCTGAAGAAGAATATGCTGAGGCCCTCAGAAGCAAACAGATTACAGCTGCTTTCCTTGAGGCCCCTGGCGCCAAACTCTTCCTTGCAAAGTACTGTAAAGAGTTCATTCAAGCTGGTCCTATGTACAGAATTGGAGGATTTGCCTTTGTAATGCTTCCACACTTCCTCTTACATGATTACATATTTGCATTTCCAAGGAAATCACCATTGCTTCCTACTGTGAACGAAGCCCTGTTACAGGCAATTGAGAATGGCAAGCTACTTGATTTGGAAAATGAAATGCTTGCTTCACAGCAATGTGAAGGCACTTATTCAGACCAAAAAAACATAAGCCTTAGCCATACTAGCTTCTGGGTTCTCTTCACATTGACTGGAAGCACATCAACAATTGCTTTCTTGCTTTACATGTTTTGTAACAATAATTCAAATAACAAATACAGAACATTGTGGAGAATAACAATGGCCATTGTTCAACACTGGGGATCTCTGAAGAGGCAGTTCTTAAGAAGAGTCAGTGATGTTGCAATTCTTATGAGCTCTCCACATGCACCTACTTTGGCAACTCATGTCTAA 2397 0.4255 MGNMRRHRLVPSLCLMMMTVITVLGSAGRSHEDAPVIIIGAITDHSSRIGKEQSVAMKMALEDFFQHTNQSFLLHIRDSHGDPHQAALAARDLIKKQKVQVIIGPQTWEQTSSVTDICSENNIPLLSLANATKKWDFLLQALPSHFSHMRTVAAIVESWEWYQVNIIYEDTPFFSSGVLPHLSTALKEANIGISNLVPVPPFVSSSLYEELQRLREVQCRVFVVHVSCSLAIQLFEAAQRLKMMEKEYVWIVTDPFTSVVHSLNVSTLSSMQGVIGVRSYFSQVGHRYEDFYLRFRHKYSSDHPREFDNEPRVFAAQAYDAAWSLALAMRESNKTGGQILLDKILLSNYFGLSGKIQFTDHRLVAANTFQIINVIGKKYVELGFWSEGLNFSRTIGPNAAYNSSMKVLGPVFWPGGPWNAPRGWTLPTNDKPLRIGVPTQSTIKHFVKIVRDDSNNITSFHGFSIDLFRATVELLPYHLPYQFFAFNDTYDNLVKQIHYKLNNSVLNQTGAIVWLSFTTLISLHGVKLHSNLSRMVMIVWLFVALIITQTYIINLANLLTVEKLEPTVNNVDQLRKSNAIVGYDRGSFMKNYMHDVLHFHPTNTRQFNSEEEYAEALRSKQITAAFLEAPGAKLFLAKYCKEFIQAGPMYRIGGFAFVMLPHFLLHDYIFAFPRKSPLLPTVNEALLQAIENGKLLDLENEMLASQQCEGTYSDQKNISLSHTSFWVLFTLTGSTSTIAFLLYMFCNNNSNNKYRTLWRITMAIVQHWGSLKRQFLRRVSDVAILMSSPHAPTLATHV 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2901 798 Pfam Receptor family ligand binding region 55 375 IPR001828 -
Bisa02g2901 798 Gene3D - 33 153 - -
Bisa02g2901 798 Pfam Bacterial extracellular solute-binding proteins, family 3 548 700 IPR001638 -
Bisa02g2901 798 Gene3D - 154 307 - -
Bisa02g2901 798 SMART GluR_14 434 705 IPR001320 GO:0015276|GO:0016020
Bisa02g2901 798 Gene3D - 549 698 - -
Bisa02g2901 798 PIRSF IGluLR_plant 7 503 IPR017103 -
Bisa02g2901 798 PIRSF IGluLR_plant 499 782 IPR017103 -
Bisa02g2901 798 SUPERFAMILY Periplasmic binding protein-like II 407 699 - -
Bisa02g2901 798 FunFam Glutamate receptor 148 309 - -
Bisa02g2901 798 CDD PBP1_GABAb_receptor_plant 39 395 IPR044440 -
Bisa02g2901 798 CDD GluR_Plant 431 703 - -
Bisa02g2901 798 SUPERFAMILY Periplasmic binding protein-like I 35 424 IPR028082 -
Bisa02g2901 798 Gene3D - 313 431 - -
Bisa02g2901 798 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 39 500 IPR015683 -
Bisa02g2901 798 Pfam Ligand-gated ion channel 508 733 IPR001320 GO:0015276|GO:0016020
Bisa02g2901 798 Gene3D - 554 666 - -
Bisa02g2901 798 Gene3D - 432 508 - -
Bisa02g2901 798 FunFam Glutamate receptor 467 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2901 Bisa-ChrBisa02 73483681 73488963 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2901 21 744 Ion Channels AT3G07520 26.659 3.63e-72 251