Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2823 ATGAAGATTCAGTGCAACGTGTGTGAGGCGGCGGAGGCGGAGGTTCTCTGCTGCGCGGACGAGGCGGCGCTATGTCGGCAATGTGACGAGAAGGTTCATGCAGCCAACAAGCTAGCCACCAAGCACCAGAGGGTTCCTCTTTCTGCCTCTTCCTCTCACATGCCGAAATGTGATATTTGTCAGGAAACAGTTGGCTATTTCTTCTGTCTGGAGGACCGGGCTTTACTATGCAGAAAATGTGATGTGGCAATACACACAGCAAATTCGTATGTCTCCTCGCATCAGAGGTTTCTGCTCACTGGTGTAAAAGTGGGCCTTGAAGCTACTGAGCCTATTGCTTCTCCATCCTCTGCGAAGTCACATTCTGGGGGGATGATATCAGATAAAATATCTTCGTCTGTCTCTAAGAAGGTTTCTTCAATTCCTCAGTCATTTGAACACAATGAATTGTCACCTATCCAAGTTGGAGAAGTTGAGGAGTTTCAACCAACCAAAATGTCTTATGGTGGTGGTTCTACTGCTGGAAACATCTCAAACTGGCCCCTTGATGAGTTTTTTGGGTTAAATGATTTTACTCAGAATTATAATTTCATGGATAATGGACCATCCAAGGCTGACAGCGGTAAGCTTGGGGACTCTGATTCTCCTGTTTTAAGATCCAGTGAAGAGGAAACAGAAAATGATGAGTCCTTAGGTTGGGTTCCAGATTCATCCTGGACAGTTCCTCAGGTTCCTTCCCCTCCTACGGCTTCAGGGTTATATTGGCCGAAAAACCTTCAATATTCATATACTGATAGTGCTCTGTTTGTTCCTGACATAAACTCTCCTCACATTCAACAGCCCTACCATGTTCAGAAAAATAGTACATTATCAAAACGGCGGCGACGACTGTAA 894 0.4541 MKIQCNVCEAAEAEVLCCADEAALCRQCDEKVHAANKLATKHQRVPLSASSSHMPKCDICQETVGYFFCLEDRALLCRKCDVAIHTANSYVSSHQRFLLTGVKVGLEATEPIASPSSAKSHSGGMISDKISSSVSKKVSSIPQSFEHNELSPIQVGEVEEFQPTKMSYGGGSTAGNISNWPLDEFFGLNDFTQNYNFMDNGPSKADSGKLGDSDSPVLRSSEEETENDESLGWVPDSSWTVPQVPSPPTASGLYWPKNLQYSYTDSALFVPDINSPHIQQPYHVQKNSTLSKRRRRL 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2823 297 Pfam B-box zinc finger 54 95 IPR000315 GO:0008270
Bisa02g2823 297 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa02g2823 297 CDD Bbox1_BBX-like 5 47 - -
Bisa02g2823 297 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Bisa02g2823 297 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 276 - -
Bisa02g2823 297 SMART bboxneu5 52 99 IPR000315 GO:0008270
Bisa02g2823 297 SMART bboxneu5 4 47 IPR000315 GO:0008270
Bisa02g2823 297 MobiDBLite consensus disorder prediction 199 251 - -
Bisa02g2823 297 Gene3D Classic Zinc Finger 1 93 - -
Bisa02g2823 297 CDD Bbox1_BBX-like 56 99 - -
Bisa02g2823 297 MobiDBLite consensus disorder prediction 231 251 - -
Bisa02g2823 297 FunFam B-box zinc finger protein 22 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2823 Bisa-ChrBisa02 71108697 71112529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2823 1 297 C2C2-CO-like Transcription Factor Family AT1G78600 48.503 9.13e-91 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g2823 zf-B_box 2.2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2823 02 71108697 71112529 Bisa02g2823 02 71108697 71112529 ECH