Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2820 ATGGTTGGCTTCCTGAGTGATCATATCCCTGGGAATAAGTATAATGGTTACAGTAATTCATATCAATTTCCAGGTTGTGTTGAACAACTACGAAGAGAAAGAGAGCTGACAAGAAGTAGCAAAGCTTCTCATGTGAATAAGTCAACGGATAATAATGGTAGGATTGCTGAACCCTTTAGGCATGAGCATGACCAATGCTTTAGAGAAGATGATAACTGGGGCGTTTCCTATATTGAACAATACCCTAAAGAGGCTTCAGTGGCCGGAGCCCTTAGTGAGGGATGCAAAAGGAAAGATGGGAGGCCTTTTAGACAACGACTTTTGGTGGTGGCCAACAGGCTTCCAGTCTCAGCAGTTAGGAGAGGCGATGATTCATGGTCTCTGGAGATAAGTGCTGGTGGTCTTGTAAGTGGTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGTTGGATAGGATGGGCTGGTGTCAACGTGCCAGATGAGATTGGACAGAAGGCACTTACTAAAGCTTTGGCTGAAATGAGCTGTATTCCAGTATTTCTTGATGAAGAGATTGTTCATCAATATTATAATGGCTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGACCACCTTGCCACCACTAGGACTTTCCAGTCTCAGTTTGCAGCGTATAAGAAAGCAAATCAAATGTTCGCTGATGTTGTAAACAAGAACTATCAAGAAGGTGATGTTGTTTGGTGCCATGATTACCATCTAATGTTTCTTCCAAAATGCTTAAAGGAATCTAACTGCAAAATGAAAGTTGGCTGGTTTCTACACACACCATTTCCATCTTCTGAAATCCATAGGATGCTGCCATCTCGTTCAGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGTATCCTTGGGCTTGAGGGCACACCTAAAGGGGTTGAGGATCAAGGGAGGCTGACTCGAGTTGCTGCATTTCCACTTGGGATAGACTCAGATCGATTCATACATGCACTTGAGCTTCCTCAAGTTCAGGATAAAATCAAAGAATTAGAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGCGTTGATCGCCTTGATATGATTAAGGGAATTCCTCAGAAAACTCTAGCATTTGAAAAATTTCTGGAAGAGAACGCCTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCTTGAGTATCAAAAACTTGCAAGTCAGGTTCATGAAATTGTTGGTCGCATTAATGGCAGATTTGGAACACTGACTGCTGTTCCCATACATCACCTGGATCGCTCTCTTGACTTTCATGAGCTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTCACATCTTTGAGAGATGGAATGAATCTTGTCAGTTATGAATATGTGGCCTGCCAGGAGAGAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCTGCACAGTCTCTAGGTGCTGGAGCAATTCTAGTTAACCCCTGGAACATCACAGAAGTTGCTGCTGCAATTGCCCAGGCTCTGAATATGCCATCTGGAGAAAGAAAGAAGCGACATACACATAACTTTTTACATGTAAAAACCCACACTGCTCAGAAATGGGCAGAAACTTTTGTAAGTGAATTAAATGATACTGTTGTTGAGCAACAACTAAGGACAAGACATGTTCCACCACCACTTCCAACCAAGACTGCAATTGAATGTTATCTGCAGTCAACTAATCGATTGATCATTTTGGGATTCAATACAACTTTAACTGAACCAGTCGAGAAAAAAGGTGACCAGATTAAAGAAATGGAACTTAAGGTGCATCCAGAATTAAAACAACCATTGACAGAACTTTGCAGTGACCCCAAGACCACAATTGTTGTTCTTAGTGGAAGTGATAGAACAGTCTTAGAGGAGAATTTCAGGGAGTATGACGTGTGGTTGGCTGCAGAGAATGGGATGTTTTTACACCCTGCAAAAGGAGAATGGATGACAACAATGCCAGAGCTTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTCTTGAATACTTTACAGACAGAACACCCCGGTCACTTTTTGAAGAACGGGAAACTTCTCTTGTTTGGAATTACAAATATGCAGATGTTGAATTTGGAAGACTTCAAGCAAGGGACATGCTGCAGCATCTCTGGACAGGTCCAATCTCTAATTCTCCAGTTGATGTCATTCAAGGTAGCCGATCTGTTGAAGTGCGGGCTGTTGGTATTACGAAGGGAGCAGCCATTGACCGCATTGTGCGTGAGATAGCACTCAGTAAATCCATGACATCTCCAATTGATTATGTCCTGTGTATAGGACATTTTTTGACAAAGGATGAAGATATTTTTACCTTTTTCGAGCCAGAGCTTTCTTCAGCTGCTTTGGCTCTTCCACAACCAAATGTGATAGGTAAAGTAAAGTTTCATGGCGAGAGGAGATTGTGTTCAAAGACTACTCCTAGTAAAAGTGGACCAAAGTCATCGCATGGCAAGACACAAAAGCCTTGGTCAAATTCTAAGAAAAACACAAATCATATCTGTTATTCACATCGGGGTCCTATACTTGAAACTGAAAAGATTCCATGGAAACTTCTTGAACTCAAGAAGGAGAATTACTTCTCATGTGCTGTTGGACGAACTCGATCAAATGCTCGATATATGCTTGGATCGTCATCGGATGACGTTATTGCATTTTTGGAGGAACTCACACATGCATCTTTGAACTCTTTCTCATTGAGTTAA 2838 0.4158 MVGFLSDHIPGNKYNGYSNSYQFPGCVEQLRRERELTRSSKASHVNKSTDNNGRIAEPFRHEHDQCFREDDNWGVSYIEQYPKEASVAGALSEGCKRKDGRPFRQRLLVVANRLPVSAVRRGDDSWSLEISAGGLVSGLLGVKEFEASWIGWAGVNVPDEIGQKALTKALAEMSCIPVFLDEEIVHQYYNGYCNNILWPLFHYLGLPQEDHLATTRTFQSQFAAYKKANQMFADVVNKNYQEGDVVWCHDYHLMFLPKCLKESNCKMKVGWFLHTPFPSSEIHRMLPSRSELLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVAAFPLGIDSDRFIHALELPQVQDKIKELEERFKGRKVMLGVDRLDMIKGIPQKTLAFEKFLEENAYWRDKVVLLQIAVPTRTDVLEYQKLASQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHELCALYAVTDVALVTSLRDGMNLVSYEYVACQERKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIAQALNMPSGERKKRHTHNFLHVKTHTAQKWAETFVSELNDTVVEQQLRTRHVPPPLPTKTAIECYLQSTNRLIILGFNTTLTEPVEKKGDQIKEMELKVHPELKQPLTELCSDPKTTIVVLSGSDRTVLEENFREYDVWLAAENGMFLHPAKGEWMTTMPELLNMEWVDSVKHVLEYFTDRTPRSLFEERETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNSPVDVIQGSRSVEVRAVGITKGAAIDRIVREIALSKSMTSPIDYVLCIGHFLTKDEDIFTFFEPELSSAALALPQPNVIGKVKFHGERRLCSKTTPSKSGPKSSHGKTQKPWSNSKKNTNHICYSHRGPILETEKIPWKLLELKKENYFSCAVGRTRSNARYMLGSSSDDVIAFLEELTHASLNSFSLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2820 945 NCBIfam trehalose-phosphatase 603 817 IPR003337 GO:0003824|GO:0005992
Bisa02g2820 945 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 353 556 - -
Bisa02g2820 945 Gene3D Glycogen Phosphorylase B; 353 556 - -
Bisa02g2820 945 Pfam Glycosyltransferase family 20 106 571 IPR001830 GO:0003824|GO:0005992
Bisa02g2820 945 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 106 571 IPR012766 GO:0003825|GO:0005992
Bisa02g2820 945 FunFam Alpha,alpha-trehalose-phosphate synthase 627 698 - -
Bisa02g2820 945 MobiDBLite consensus disorder prediction 847 876 - -
Bisa02g2820 945 Pfam Trehalose-phosphatase 626 823 IPR003337 GO:0003824|GO:0005992
Bisa02g2820 945 Gene3D Glycogen Phosphorylase B; 98 352 - -
Bisa02g2820 945 CDD HAD_TPP 604 821 - -
Bisa02g2820 945 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 98 352 - -
Bisa02g2820 945 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 693 773 - -
Bisa02g2820 945 Gene3D - 627 817 IPR023214 -
Bisa02g2820 945 MobiDBLite consensus disorder prediction 849 876 - -
Bisa02g2820 945 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 105 574 - -
Bisa02g2820 945 Gene3D - 693 773 - -
Bisa02g2820 945 SUPERFAMILY HAD-like 604 934 IPR036412 -
Bisa02g2820 945 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 98 935 IPR001830 GO:0003824|GO:0005992
Bisa02g2820 945 CDD GT20_TPS 106 571 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2820 Bisa-ChrBisa02 71052310 71066278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2820 9 938 Trehalose Biosynthesis Gene Families AT1G78580 73.840 0.0 1384