Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2810 ATGGATTCTACTGGTGTTATGGATAGAATAAGCAAAGAACACTCGAGTTTCTATGGGTTGCAGGATGTGGAATCAGCATCTGTAATTCAATCATCTTCCTCAACAAGTGAACACAATCTTGTGGGTAAAATTATTGAGAATGTTTCCCAGAAAATTATGAGCTTACGCAGTAATGAAAAATCGATGACAGCAACGTCGGAAGTAAAGAAAGACCCTTTGACAGTGATCAGAAATCCTACTAATCACCAAGACCAAAAAGGAATGTTGGACATTAAAGTGGGAACTGAGGCGAAGATGGACACAGCTCAAAGGTTTACAAGCTCCATTAAGGGTTCATCTAAGAGGGCATTATCTCCAGGTCAGTGCACGTCAACTGTTGAGATCCGAGAAAAGGCAATCCGATCAAAGTTGGAACCGAGGTTGCCCAGCTTTGTGAAGTCATTAGTTAGATCACATGTTGCTGGTTGTTTTTGGATGGGGCCCCTATGTTGTTCTGTAAAAAAACATTTACTGGATAAGGATGGAACAGTTACCTTGGAAGATGAACATGAACTGCTTTGTGTACAATCGCAATGGTTATCTACGAGGCACAATAGTTCAGATGCATCTAATCGGCAGTCTTTCGCAGTCTCATATTTCATTGACACATTTGGGTTCTCACGCGAAGAAGCTGCTTCAGCCTCTAAGCGTGTCAGCTTCGAAACGCCAGAAAAACCAGATTTGGTGATCAACTTCTTGAAGAGTCAAGGATTCTCTAAAGCCCAGATTCTTCGTTTCTTTAGAGAAGTCCCACAGTTTCTTCGGTCTGATCCCGAGAAGACCTTTCTGCCCAAGATAGAGTTTCTCAAATCCAGAGGCGTCTCGAGCTCTGACATTCCTAAGGTTGTATCTAGTTGCCCTTCGATCCTGAAAAGAAGCTTAAGTAACCATCTTATTCCTTCCTTTGATTTCTTTCGAGATTTGTTTCAATCTGATCACAAGCTCATTAAAGTTCTTAAGGATTTCTCGGGCATTCTTGTCGATATTAACACCCATGTCCGGCCTAATATGAAGATATTAAGAGAAGCAGGAGTTCTTGAATCAAATGTTATAAAGTTATTACGATTTTTTCCCAGGGTAGTGACTATAAGTCCAGTTCGATTTAAGGGGATTGTGGAGGAAGCTAAGGAAATGGGTTTTAATCCTTCGACGTTTAAATTTATCATGGCTATTTATACATTGGCATCACTAAACAAATCCACTTGGGCAAAAAAGGCTGATACTTTTAAAAAGTGGGGTTGGTCTGACAAGGACGTTCTTCAAGCATTTAGAAATTCTCCTTTCTGTATGAAGATGTCGGAGGATAAGATTGATGGAGTAATGGAGTTTCTTGTTAACAAATTGGGCTGTGAACCTTCCGCTATAAAGAAATATCCAGCAATATTCTCGTTGAGCTTGAATAAGCGGATTGTTCCAAGGGGTTCTGTCTTGCAAGTTTTGTTGTCAAAGGGTCACATGAAAAAGAAACAGTTGCTGGCACTATTTATCTACACCGAAAGTGTCTTTCTAAAAAGAGTTATCCTTCATCATGAGAAGGAAGGTAGTGAATTGTTGAAGCTGTATCAGGCTAAATTAGAGCTTCCTGGGTGA 1629 0.4027 MDSTGVMDRISKEHSSFYGLQDVESASVIQSSSSTSEHNLVGKIIENVSQKIMSLRSNEKSMTATSEVKKDPLTVIRNPTNHQDQKGMLDIKVGTEAKMDTAQRFTSSIKGSSKRALSPGQCTSTVEIREKAIRSKLEPRLPSFVKSLVRSHVAGCFWMGPLCCSVKKHLLDKDGTVTLEDEHELLCVQSQWLSTRHNSSDASNRQSFAVSYFIDTFGFSREEAASASKRVSFETPEKPDLVINFLKSQGFSKAQILRFFREVPQFLRSDPEKTFLPKIEFLKSRGVSSSDIPKVVSSCPSILKRSLSNHLIPSFDFFRDLFQSDHKLIKVLKDFSGILVDINTHVRPNMKILREAGVLESNVIKLLRFFPRVVTISPVRFKGIVEEAKEMGFNPSTFKFIMAIYTLASLNKSTWAKKADTFKKWGWSDKDVLQAFRNSPFCMKMSEDKIDGVMEFLVNKLGCEPSAIKKYPAIFSLSLNKRIVPRGSVLQVLLSKGHMKKKQLLALFIYTESVFLKRVILHHEKEGSELLKLYQAKLELPG 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2810 542 PANTHER CGI-12 PROTEIN-RELATED 206 524 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 257 288 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 433 464 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 364 394 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 329 359 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 293 324 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 SMART mt_12 465 499 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 FunFam Mitochondrial transcription termination factor-like 307 526 - -
Bisa02g2810 542 Pfam mTERF 243 397 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 Pfam mTERF 409 515 IPR003690 GO:0003690|GO:0006355
Bisa02g2810 542 Gene3D Transcription termination factor 3, mitochondrial 324 532 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2810 Bisa-ChrBisa02 70858184 70865869 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2810 127 182 B3 DNA Binding Superfamily AT5G42700 45.161 7.01e-08 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bisa02g2810 mTERF 1.5e-21 No_clan