Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2788 ATGAGCAAGTCCCTGGTATTAGCCTTTCACATCACCATATGCTGCATTGCTTTTATCATATCCAAGATCATTATCTCAGTCCTCCTCTACAAAAGATGGAAAAGAAAGCACATGATTTATGAAGATGGCTACGCAGGAGGGAAGATGGTAATATTTAGATCTTCAGTTCTTCAGTCTCTGAAATCAGATATGATCTTGAAGAAGGCACTGAAACTGAACGACATGGATGTTATAGGCTGTGGTGGATATGGGACAGTTTATAAGGTGAAAGTAGACAACTGCAAAGCCTTTGCTGTGAAAAGGCTGAACAGAGGAAGTGCAGATGGAGACAAAGCATTTGAGAGAGAGTTGGAAGCCATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTACACTGCTCCACATTACAACCTTCTCATATATGAGCTAATCCCCAATGGAAGTTTGGATACCTTCCTGCATGGAAGAGAAGAGCAGGTGAAAATTTTGAATTGGGCATCGAGATACAGAATAGCTATAGGTGCTGCTAGGGGAATATCATATCTTCACCATGATTGCATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGGTTGACGAGAACATGGAGGCCAGAGTTTCTGATTTTGGATTAGCCACATTGATGGCACCGAACCAAACCCATGTTTCAACCGTTGTGGCTGGAACTTTTGGATACTTGGCTCCTAAATATTTTGATACGGGAAGAGCAACTTTCAAAGGGGATGTCTACAGCTACGGAGTTGTGCTGCTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAGCATTTATGGAAGAAGGAACCAAGCTTGTCACATGGGTTAAGGTTGTTGTTCGAGAAAAGAAGAAGGAGCTAGTTCTCGACGATAGGCTTGGGACCTGTCCAAAGCAAGAGGTTAACAATGTGTTCAACATTGCAATGATGTGTCTTGAATCTGATCCCTCGAAGAGGCCAACAATGGCTGAGGTTGTAACCTTGCTCGAGCAGACGAAGCCAGACAAACCTGTCACAGCTGTCTGA 1065 0.4282 MSKSLVLAFHITICCIAFIISKIIISVLLYKRWKRKHMIYEDGYAGGKMVIFRSSVLQSLKSDMILKKALKLNDMDVIGCGGYGTVYKVKVDNCKAFAVKRLNRGSADGDKAFERELEAMADIKHRNIVTLHGYYTAPHYNLLIYELIPNGSLDTFLHGREEQVKILNWASRYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILVDENMEARVSDFGLATLMAPNQTHVSTVVAGTFGYLAPKYFDTGRATFKGDVYSYGVVLLELLTGRKPSDEAFMEEGTKLVTWVKVVVREKKKELVLDDRLGTCPKQEVNNVFNIAMMCLESDPSKRPTMAEVVTLLEQTKPDKPVTAV 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2788 354 FunFam Receptor-like serine/threonine-protein kinase 43 147 - -
Bisa02g2788 354 SUPERFAMILY Protein kinase-like (PK-like) 71 345 IPR011009 -
Bisa02g2788 354 Gene3D Transferase(Phosphotransferase) domain 1 148 351 - -
Bisa02g2788 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 13 346 - -
Bisa02g2788 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Bisa02g2788 354 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
Bisa02g2788 354 Pfam Protein kinase domain 74 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2788 354 Gene3D Phosphorylase Kinase; domain 1 42 147 - -
Bisa02g2788 354 ProSiteProfiles Protein kinase domain profile. 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2788 354 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 148 352 - -
Bisa02g2788 354 SMART serkin_6 72 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2788 Bisa-ChrBisa02 70387706 70390711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2788 3 344 Receptor kinase-like Gene Family AT2G35620 44.928 9.16e-101 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Bisa02g2788 Pkinase 3.5e-49 CL0016