Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2754 ATGAGCACCTCATCACAGCCCATCACTTGCAAAGGTGCAGTATGCTGGGGACTAGGAGAGGCAGTGAAGGTGGAAGAGATAACAGTGGATCCACCGAAAGCATCCGAAGTTAGAATAAAGATGATTTGTGCCAGTGTGTGCCACACAGACATCGCAAGCATTAAAGGAATCCCGCATACTAACTTTCCCCGAGTACTAGGACATGAAGGAGTGGGAGTGGTGGAAAGCGTAGGGGAGGGGGTGAGGAAGGTGGAGGTAGGGGACGTGGTGATCCCAGTGTACATAGGAGAGTGCGGAGAATGTGGGAACTGTGTTTCGGGGAAGACGAACCTGTGTAGGACGTACCCGAACAGGTGGAGTGGGCTAATGGGAGACAACACCTCAAGAATTGGGTTGGGAGGGGGGAGGAGGGCGTACCACGTGATGGGCTGCCCCACGTGGTGCGAGTACGCGGTGGCTGACGTCAACTACGTCCTCAAGGTGGACCCAGCCATGCTCCCTGCCCACGCCAGCTTCATCTCCTGCGGCTTCTCCACCGGCTTCGGAGCCGCCTGGAAGGAGGTCCAGGTTGAACCGGGATCTGCTGCCGCCGTTTTTGGTCTCGGTGCCGTTGGACTAGGGGCTGTAAGTGGAGCCAAAATGTTTGGGGCAACAAAGATAATTGGGATAGACACGAATGAGATGAAGAGGGAGAAAGGAGAAGCTTTTGGAATGACACATTTCATAAATCCTGCTGTCTCAGATAAATCTGTGTCAGAATTGGTCAAAGAGTTGACCAATGGAATGGGTGTTGATTATTCCTTTGAGTGCACTGGAGTCCCTCCTTTGCTCAATGAAGCCATGGAAGCCACAAAAGGGGGAACAGGTACGACCATAGCAGCTGGAACAGGATTTGGAGAAGTGAAGCTTAGGCATCGCGCCATTCTGTATGGAAGAACAATAAAGGGTTCTATTTTTGGAAAGCTGAAAACCAGGACTGACCTTCCCTTTATAGTCGACAAGTGTCAGAAGAAGGAAATTCCCATCCATGAACTTTTGACCCATGAAGTCTCATTGGCAGACATCGCCAATGCATTCGAGTTATTGAAACAGCCAGATTGTGTCAAAATTGTCATCACGATGTGA 1125 0.5084 MSTSSQPITCKGAVCWGLGEAVKVEEITVDPPKASEVRIKMICASVCHTDIASIKGIPHTNFPRVLGHEGVGVVESVGEGVRKVEVGDVVIPVYIGECGECGNCVSGKTNLCRTYPNRWSGLMGDNTSRIGLGGGRRAYHVMGCPTWCEYAVADVNYVLKVDPAMLPAHASFISCGFSTGFGAAWKEVQVEPGSAAAVFGLGAVGLGAVSGAKMFGATKIIGIDTNEMKREKGEAFGMTHFINPAVSDKSVSELVKELTNGMGVDYSFECTGVPPLLNEAMEATKGGTGTTIAAGTGFGEVKLRHRAILYGRTIKGSIFGKLKTRTDLPFIVDKCQKKEIPIHELLTHEVSLADIANAFELLKQPDCVKIVITM 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2754 374 FunFam S-(hydroxymethyl)glutathione dehydrogenase 180 317 - -
Bisa02g2754 374 CDD liver_alcohol_DH_like 8 373 - -
Bisa02g2754 374 Gene3D - 13 369 - -
Bisa02g2754 374 SMART PKS_ER_names_mod 17 372 IPR020843 GO:0016491
Bisa02g2754 374 Gene3D - 180 317 - -
Bisa02g2754 374 Pfam Zinc-binding dehydrogenase 203 322 IPR013149 -
Bisa02g2754 374 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 337 IPR036291 -
Bisa02g2754 374 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Bisa02g2754 374 Pfam Alcohol dehydrogenase GroES-like domain 35 158 IPR013154 -
Bisa02g2754 374 SUPERFAMILY GroES-like 3 186 IPR011032 -
Bisa02g2754 374 PANTHER ALCOHOL DEHYDROGENASE 6 366 - -
Bisa02g2754 374 SUPERFAMILY GroES-like 324 373 IPR011032 -
Bisa02g2754 374 FunFam alcohol dehydrogenase 1-like isoform X1 18 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2754 Bisa-ChrBisa02 69690325 69693837 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2754 35 366 Monolignol Biosynthesis Gene Families AT2G21730 26.113 5.28e-11 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2754 02 69690325 69693837 Bisa02g2754 02 69690325 69693837 ECH