Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2719 ATGGAGCTTGGTCTGAGCTTAGGCCTCAACCTCAACACTACTTTATCAATTGGTCCAAATCTCAGTAACAAGAGCTGTGATCGTCGTCATCATCAAGAAGAAGAAGAAGCTGAAGCAGAAGAAGCAGCAGTGAAGAAGGAGAATCATAGTACTGTTACTAATCAAGATCACGAAGCTACGAATAAATTATTTCCTATTGTTTCTCTTTCTCCTAAGGCCGATCATAAGATTAATAATAACTCCTTACAGCTTGATCTTCTTCCACTCTCCTCCTTCCCATGGCCTCCTCCAGAAAACGGTGATGACGTGGCAGCTTCTTCAAGGGGCTTGAAGATGAGCGGATTACCGGCGGCAGAGGAGGAAGAGTCGGAGGAGAGGGCGGGGCTATCGTCGTCTCCGAACAGCGGAACGTCGTCGTTTCCGATGGATCTGAGTATATATAGCAGAAGAGGAGAGAGAGGGAGTAGTATTAGTATGAGTGCCTCAGGGAACAACAACAACATTAATGGAGGCGAGGCTTCTTATTATGATCATCAGAGGGCATCTTCAAGAGCGAGTGACGAAGACGACAACGTTGGAGTAGGTAGTACAAGGAAGAAGCTCAGGCTGTCCAAGGAACAGTCTGCTTTTCTTGAAGAGAGCTTCAAAGAGCACAGTACTCTTAATCCCAAGCAAAAGCTTGCTCTTGCAAAACAACTCAATCTTCGTCCTCGCCAAGTAGAGGTTTGGTTTCAAAACAGAAGAGCAAGGACCAAATTGAAACAGACAGAAGTAGACTGTGAATATCTAAAGAGGTGTTGTGAGACATTATCAGAAGAGAACAAGAGACTGCAGAAGGAGCTTCAAGAACTGAGGGCTTTGAAGGCTTCAACTTCAAACCCATTCTTCATGCAATTACCGGCTACAACCTTGACCATGTGTCCTTCATGCGAGCGCGTCACACCCAATAATCCCAACCCCTCTTCTTCTTCTTCAACTCCTCTTTCTGCCGCCGCCGCCGGTGGAGGAGCAGGAGGAGCCGCCGCCTCTAAACCCATCGGATTCCCCTTTGGCAAACCCAAATTTTATCCTTTCGCTCACTCTAAACCGCACCAATAA 1098 0.4663 MELGLSLGLNLNTTLSIGPNLSNKSCDRRHHQEEEEAEAEEAAVKKENHSTVTNQDHEATNKLFPIVSLSPKADHKINNNSLQLDLLPLSSFPWPPPENGDDVAASSRGLKMSGLPAAEEEESEERAGLSSSPNSGTSSFPMDLSIYSRRGERGSSISMSASGNNNNINGGEASYYDHQRASSRASDEDDNVGVGSTRKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLSEENKRLQKELQELRALKASTSNPFFMQLPATTLTMCPSCERVTPNNPNPSSSSSTPLSAAAAGGGAGGAAASKPIGFPFGKPKFYPFAHSKPHQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2719 365 MobiDBLite consensus disorder prediction 151 173 - -
Bisa02g2719 365 FunFam Homeobox-leucine zipper protein 18 181 259 - -
Bisa02g2719 365 ProSiteProfiles 'Homeobox' domain profile. 194 254 IPR001356 GO:0003677
Bisa02g2719 365 MobiDBLite consensus disorder prediction 310 343 - -
Bisa02g2719 365 Gene3D - 202 252 - -
Bisa02g2719 365 SMART HOX_1 196 258 IPR001356 GO:0003677
Bisa02g2719 365 MobiDBLite consensus disorder prediction 18 57 - -
Bisa02g2719 365 MobiDBLite consensus disorder prediction 181 200 - -
Bisa02g2719 365 Pfam Homeobox associated leucine zipper 254 288 IPR003106 GO:0006355|GO:0043565
Bisa02g2719 365 MobiDBLite consensus disorder prediction 310 330 - -
Bisa02g2719 365 MobiDBLite consensus disorder prediction 24 53 - -
Bisa02g2719 365 SMART halz 254 299 IPR003106 GO:0006355|GO:0043565
Bisa02g2719 365 Pfam Homeodomain 198 252 IPR001356 GO:0003677
Bisa02g2719 365 Coils Coil 260 290 - -
Bisa02g2719 365 MobiDBLite consensus disorder prediction 128 144 - -
Bisa02g2719 365 SUPERFAMILY Homeodomain-like 184 255 IPR009057 -
Bisa02g2719 365 CDD homeodomain 198 255 IPR001356 GO:0003677
Bisa02g2719 365 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 42 326 - -
Bisa02g2719 365 ProSitePatterns 'Homeobox' domain signature. 229 252 IPR017970 GO:0000981|GO:0006355
Bisa02g2719 365 MobiDBLite consensus disorder prediction 112 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2719 Bisa-ChrBisa02 68836331 68838639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2719 181 360 Homeobox Transcription Factor Family AT4G37790 60.440 1.48e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa02g2719 Homeodomain 1.8e-15 CL0123