Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2716 ATGGAAAAGCAGCAACACCAAAACCGCCACCACCACCACTCCGACGACAAGCACGGCCACCGCCACCACCGCCACCTCCACAAGACTTGGGGCACGTGGGAGGAGCTTGTTCTGGCCTGCGCCGTCAAGCGCCATGGCTCCAACGACTGGGACGCCGTCGCCGTGGAGATCCAGAAACTCACCAACCTCCCTCACCTCCTCACCACCGCCCGCAACTGCAAGCAGAAATTCCTCGATCTCAAACTCCGATTCGCCGACCAATGCAACGACGACGTTCCGGAGCCTCCGGAGAACTGCGCTCCCGCCGGCGACGCTGTCGATCACGTCCCCTGGATCGACGAATTGCGTAAGCTCCGGGTCGCCGAGCTCCGTCAAGAGGTCCAGCGTTCCGACGTCTCCATTCTGAAGTTGCAGGTCAAGGTGAAGAGGTTGGAGGAAGAGAGAGAACAGAACTTGAAGGAGAATGACGGAGAACGAGATGAGAAACCAGATCTGGAAGACACCGGGAAACCGGAAAAGGACGAAAAAAGCGGAGATGAAGAAGTGGAGGCTGAACCGGCCAGCTCCAAACCGGTGAGGCGGGTCGATGACGACAGGGATGATAATGATAATAATAATAATAAGAATAATAACATTAGTAACAACAACGATAGTAATAAGCTCCCAACCGGAGAGGAATTCGACCCGGAGAATCAATCGGTTAACGAGTCTAGTTCGACCGGTTCGAAATTTGTAGGGCAAAAAATCAGGGAGGAAGATGTGAAAAAAGAATTGCCTCTGGTCGATTTTGACTCTAAAGAATCGGATTCGAGCGAGGGGCAAAAAGTGGAGGACTCGTCTGAGTTGAGAGACTCGGTGGCTCACTCGGAAGGAGGGACGAGGGAGAGTAGTGAGGTGCAAAGTTCGGCGAGTTTGACGAGGAAGAGGAAGATGCGGCAGCGGAAGAAGGTCTCCAACGAAAGTAACAGCGGTAAAGGGGCGTCGGAGAACGACGAGATGTACATGAAATCACATCCGTTGGTTAGCGTATTGGAATTGATCAAACGACATGAAAACAACTCATTCTTTGAGCGTCATCTTAAAAGTCAGCGGGAATCGGAGAAATACAAGAACATAGTGCGACAGCACGTAGACCTAGACACCATACAAACCCGACTCCGAAACGGATCCTACTCATCCTCCACTTCCGCCTTCTTCCGCGACCTCCTTCTCCTCCTCACCAACGCCACCATCTTCTTCCCCGCAGACTCCGTCGAATCACACACCGCCCTGAAGCTCCGGCGGCTCATAGACGTCGAGATCAAGAACCATATCCGAACCCATCAACCCGACCCGACTCTTTCCCACAAAACCGACCATTCACTCCCACCACCGTCACAAACCAAGCCTGAGTCTTCTTTGCTTTCCAAACACAAGGCTTCTGCTCCTATATTGGTGTGCAGGAAACGAACTTCCATCTCAGCTAAATCTTCTTCATTTGGCCAAAAGAGTGGTGACAGCGAGAAGAAGCCAGCTTCGGATTCAAAACCACCCCAGAAGCGCTCTCCGCCTTCTGATGATGATTCCGACGAAGACGACCTGCCTCCTCCGCCGCCTAAGATGAGGGAGAAGCCAGTGACCGGTGCGAGAAGCCTGAGAAGAAGCAGTAAAAACCTCATCGGCCGGGCCGCCAACCCGATCAAGAAGCTTCAGACTAGCGGTTCTACCCCAAAAGCAAGCTCTCCCAAGCCAGATCATAAAGGTAAAGCCACGTCGGCGGCAGCAGCGGAGGCGTCTGTGTCTGACAAGAAGAGGAGTGCAGCCGCAGATTTCTTGAAAAGGATAAAGAGAACGGGCCCGGCGGGCGCTTCAAGGAGCGACGCCGGCGGCAGTAGTAGCAGCAAAGGAGGTGGAGGAAGTAATGGGAAAGATCAGAAGAAGGTGATGAGTAGTGGGAAGAATGAAAAAGGGAAAGAGAGGGTATTAAGGCATAGTGGTGGTGGTGGGGATAGAAAGAACGACAATACTGAGAATAATAGCAGTCAATCGAAGAGAAGTGTTGGGAGGCCTCCAAAGAAGGCATCAGAAACAAATGCTTCAGTTTCTGCAAAGAGAGGAAGGGAAAACAGTAGTGGTGGAAAGGACAAGAGGCCCAAGAAACGTACTAGGAAGTAG 2154 0.5246 MEKQQHQNRHHHHSDDKHGHRHHRHLHKTWGTWEELVLACAVKRHGSNDWDAVAVEIQKLTNLPHLLTTARNCKQKFLDLKLRFADQCNDDVPEPPENCAPAGDAVDHVPWIDELRKLRVAELRQEVQRSDVSILKLQVKVKRLEEEREQNLKENDGERDEKPDLEDTGKPEKDEKSGDEEVEAEPASSKPVRRVDDDRDDNDNNNNKNNNISNNNDSNKLPTGEEFDPENQSVNESSSTGSKFVGQKIREEDVKKELPLVDFDSKESDSSEGQKVEDSSELRDSVAHSEGGTRESSEVQSSASLTRKRKMRQRKKVSNESNSGKGASENDEMYMKSHPLVSVLELIKRHENNSFFERHLKSQRESEKYKNIVRQHVDLDTIQTRLRNGSYSSSTSAFFRDLLLLLTNATIFFPADSVESHTALKLRRLIDVEIKNHIRTHQPDPTLSHKTDHSLPPPSQTKPESSLLSKHKASAPILVCRKRTSISAKSSSFGQKSGDSEKKPASDSKPPQKRSPPSDDDSDEDDLPPPPPKMREKPVTGARSLRRSSKNLIGRAANPIKKLQTSGSTPKASSPKPDHKGKATSAAAAEASVSDKKRSAAADFLKRIKRTGPAGASRSDAGGSSSSKGGGGSNGKDQKKVMSSGKNEKGKERVLRHSGGGGDRKNDNTENNSSQSKRSVGRPPKKASETNASVSAKRGRENSSGGKDKRPKKRTRK 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2716 717 Gene3D - 327 444 IPR036427 GO:0005515
Bisa02g2716 717 SMART sant 26 83 IPR001005 -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 440 474 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 148 205 - -
Bisa02g2716 717 PANTHER DNA-BINDING BROMODOMAIN-CONTAINING PROTEIN 15 717 - -
Bisa02g2716 717 Coils Coil 127 161 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 206 245 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 452 468 - -
Bisa02g2716 717 Pfam Myb-like DNA-binding domain 28 80 IPR001005 -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 665 700 - -
Bisa02g2716 717 SUPERFAMILY Bromodomain 335 439 IPR036427 GO:0005515
Bisa02g2716 717 MobiDBLite consensus disorder prediction 500 520 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 641 664 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 148 334 - -
Bisa02g2716 717 CDD SANT 29 81 IPR001005 -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 292 306 - -
Bisa02g2716 717 CDD Bromodomain 340 434 - -
Bisa02g2716 717 MobiDBLite consensus disorder prediction 1 23 - -
Bisa02g2716 717 Pfam Bromodomain 343 423 IPR001487 GO:0005515
Bisa02g2716 717 MobiDBLite consensus disorder prediction 246 291 - -
Bisa02g2716 717 ProSiteProfiles Bromodomain profile. 348 420 IPR001487 GO:0005515
Bisa02g2716 717 MobiDBLite consensus disorder prediction 486 717 - -
Bisa02g2716 717 SMART bromo_6 333 439 IPR001487 GO:0005515
Bisa02g2716 717 MobiDBLite consensus disorder prediction 618 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2716 Bisa-ChrBisa02 68707611 68713401 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g2716 Bromodomain 1.2e-11 No_clan