Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2710 ATGGACATCGACTTCTCATACACCTCCAACTGGCTCTACGATTATGGCTTCGGTATTTCTGTTGCCGGAGCTGAATTCCCGGCTACGGCTTCCGGTGGTTTCAATTGGGTGCCTCAAACTTTCAAGGATTCTTCCGATATGAGCTTGGACATGGAATGCTCACTCGAGAATTCAACTGCGCTGGAAAATGGTCCATCAAAACGGTTGAAGACTGAATCATGTGCATCTGGCTCTAAGGCATGTCGTGAGAAATTGCGAAGGGATAGACTTAATGAGAGGTTCATGGAGTTGAGTGCTATCTTGGAACCTGGGAAGCTGCCCAAGACGGATAAGGCTGCTATATTAAGTGATGCAGCTCGAATGGTAACTGAATTAAGAAGTGAAGCCCAGAAGCTGAAGGAAACAAATGATGAGTTGCTTGTAAAGATTAAGGAACTGAAGGTTGAGAAGAATGAGCTTCGTGATGATAAGAATAGGCTGAAGATGGATAAAGAAAAGCTGGAGCAACAAGTCAAAGTGATGAATGCACAGCCTACCTATCTGTCTCATCCCTCTGCTGCATTTACTCCTCAAGGGCAACCTGCCAACCGCAAGCTAATACCTTTTGTTGGTTATCCTGGAATTGCCATGTGGCAATTTTTGCCACCTGCTGCAGTTGACACATCCCAGGATCATCTTCTTCGCCCTCCTGTGGCAGGGGAGGCAGCAGCAGGAAATTCAGTGGAAGGAATGACAGGGGAGAATGTAGGACTATCCAGATGTGTTTCAAACAGTGGACTTGGTGCTGCCAGAATATATTCCGGAGATTCAGCCGGTGAGTTAGTAGATTCCGGAGATTCAGCCGGTGAGTTAGTAGATTCTGGAGACTCAGCTGGTGAGTTAGTAGATTCTGGAGATCCAGCTGAGGGAATAATAGGCCTTGCAGGTGAAATTTCAGGTGAAGGAGACACTGCAGGGGAAATGGTAGAAGCTGCACTTGCAAGAGTGTCTACTTCCAGCTTCATACCTTGGCTGCAGTGTCCTAATGATCCACAGATGAAGTATCTTTTGCCTGGTGAAGTGAGAGGGACAACTGTGGTGCCATCACTGTAA 1092 0.4679 MDIDFSYTSNWLYDYGFGISVAGAEFPATASGGFNWVPQTFKDSSDMSLDMECSLENSTALENGPSKRLKTESCASGSKACREKLRRDRLNERFMELSAILEPGKLPKTDKAAILSDAARMVTELRSEAQKLKETNDELLVKIKELKVEKNELRDDKNRLKMDKEKLEQQVKVMNAQPTYLSHPSAAFTPQGQPANRKLIPFVGYPGIAMWQFLPPAAVDTSQDHLLRPPVAGEAAAGNSVEGMTGENVGLSRCVSNSGLGAARIYSGDSAGELVDSGDSAGELVDSGDSAGELVDSGDPAEGIIGLAGEISGEGDTAGEMVEAALARVSTSSFIPWLQCPNDPQMKYLLPGEVRGTTVVPSL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2710 363 CDD bHLH_AtILR3_like 79 154 - -
Bisa02g2710 363 Coils Coil 115 177 - -
Bisa02g2710 363 Gene3D arf6 gtpase in complex with a specific effector, jip4 124 178 - -
Bisa02g2710 363 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 74 125 IPR011598 GO:0046983
Bisa02g2710 363 FunFam Transcription factor bHLH34 66 123 - -
Bisa02g2710 363 Pfam Helix-loop-helix DNA-binding domain 78 125 IPR011598 GO:0046983
Bisa02g2710 363 SMART finulus 80 131 IPR011598 GO:0046983
Bisa02g2710 363 MobiDBLite consensus disorder prediction 276 299 - -
Bisa02g2710 363 Gene3D - 67 123 IPR036638 GO:0046983
Bisa02g2710 363 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 80 151 IPR036638 GO:0046983
Bisa02g2710 363 PANTHER BHLH TRANSCRIPTION FACTOR 8 232 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2710 Bisa-ChrBisa02 68599198 68603310 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2710 8 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 56.303 3.81e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g2710 HLH 3.5e-08 No_clan