Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2689 ATGATCCACACTCACAACTCTGAAAGATCTCAACTTTGGATTCAAAATGCTACAAATTTTGAATTAAAATTACCAAGGAAGATGAGCGTTCTGTATAGACCCAATACTCTACAGTACTCAGATGGAGAGTTAAGAAAAAACCCAGAAATGGATTCAATTCACCACTTGAATTCTGGACTATCAAGGTACCGTTCTGTTCCAAGCTCATTTCTGGCAAGCCTTGTTCAGAGCAGCCATGGGTGTGTGAATGAGGAAGCTTCTAGAAGCATATATCATCACCATCAACAACCTTCTTCAAGTTCAGAAATGGAAGCCATGTTGGGCAAGCTGGTTTCCTCATCCAACAATGGGTGGATCAAGCAGGAAGAAGCAGGGGACTCTGTTTCAGAGGGACAGAATGGGTACAAGTATAATTCCAATTATGGTTCTCAGATAATTTACCAGTCTCAGCAAGCTCAAGGCTTATCCAATGGGTCTTTGGGTTCTTCTGGGAGTGCTTTTGAAGGGCCATTCAATTCCACTGAGTCCAAAATGGGGTCTAATAATCTAATTAGACAGAAGAGTTGTCCTGCTGAACAGTTCAACAATTCCCCAATTGAAAATGGTTTTGCAGGATGGGAAGATGTGAGGAGTTACAGAGGGTGTGACATCTCAAAGGGGCGAGCCTTCTCTTCAAGGCCATCATCTTCTTGCTCCACACATTTTCCTCACATTGCTGAAACTGGAAATGAAACCCTAGAAGCAGCAACTTGTAGCAGAAACCTCAGCAATGACAACAATGGCGTCAACATAAAATGCTATGTGCCCAGCTTCACAGGTGACTTCTGGAATGGCTCTGCTTTCACTGACCCTAAAACAGCCAGTGACAACGATGACATCATGTTTGCTGCTTCAAATGCTTTTGAATCTCAGAATGCAGATTTTGGGTATCAAAGTCATGGTTTGACTCATCACTTGAGTCTGCCTAGTTCTTCAACAAAGATGAGTGCCATAGATAAGTTTCTGCAAATTCAGGGCTCTGTTCCTTGTAAGATTCGAGCCAAAAGAGGCTTTGCCACTCATCCTAGGAGCATTGCCGAGAGGGTAAGAAGAACACGGATCAGTGAAAGAATAAAGAAATTGCAAGAGCTTTTTCCAAAATCAGACAAGCAAACAAGCACAGCAGATATGTTGGATTTGGCAGTTGATTACATTAAAGACTTACAGAAACAAGTGAAGATGCTCGCAGATGTTAAGGCAAAGTGCAAGTGTTCAAGTATTCAGAATCACAACTCAAGACCTTGTACCTAG 1290 0.4217 MIHTHNSERSQLWIQNATNFELKLPRKMSVLYRPNTLQYSDGELRKNPEMDSIHHLNSGLSRYRSVPSSFLASLVQSSHGCVNEEASRSIYHHHQQPSSSSEMEAMLGKLVSSSNNGWIKQEEAGDSVSEGQNGYKYNSNYGSQIIYQSQQAQGLSNGSLGSSGSAFEGPFNSTESKMGSNNLIRQKSCPAEQFNNSPIENGFAGWEDVRSYRGCDISKGRAFSSRPSSSCSTHFPHIAETGNETLEAATCSRNLSNDNNGVNIKCYVPSFTGDFWNGSAFTDPKTASDNDDIMFAASNAFESQNADFGYQSHGLTHHLSLPSSSTKMSAIDKFLQIQGSVPCKIRAKRGFATHPRSIAERVRRTRISERIKKLQELFPKSDKQTSTADMLDLAVDYIKDLQKQVKMLADVKAKCKCSSIQNHNSRPCT 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2689 429 FunFam Transcription factor bHLH130 family 352 421 - -
Bisa02g2689 429 Gene3D - 353 423 IPR036638 GO:0046983
Bisa02g2689 429 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 351 401 IPR011598 GO:0046983
Bisa02g2689 429 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 354 416 IPR036638 GO:0046983
Bisa02g2689 429 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 68 422 - -
Bisa02g2689 429 SMART finulus 357 407 IPR011598 GO:0046983
Bisa02g2689 429 Pfam Helix-loop-helix DNA-binding domain 357 402 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2689 Bisa-ChrBisa02 68168114 68171975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2689 50 414 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 36.090 1.44e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g2689 HLH 1.7e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1368 12 23610234 23614429 Bisa02g2689 02 68168114 68171975 ECH
Bisa02g2689 02 68168114 68171975 Bisa02g2689 02 68168114 68171975 ECH