Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2688 ATGCTCGTCACTGCCACATCAACAATGAGGCTGATCCAGCTCAGACACATCATCACAATCAGCCCTAGTACTGATGGGCCTCTATTACCAGGTCATCCTCCGTTTAGCCTTCTTTGGTCGTCCCTCGAAACGGAGAGCGATTCAGCTTTTGCGTCGGAATCTGTATATTTTAACTCTGGTTGCTGTGTGATTTCTTGCTGGCGATTTGCAAATGCGGAGTCAGTTGTGATCGATCATTGCTATCACTGCATCGTTGGTCAATATGTCTGGATTTTGATATTGGTTAATACTGCTGCTAGATTCATTGGAGTGCCTCCTAGCCTCTTTGTTAATGATGGTTCTTTCATGGAGAGGTTCAAGCAACTTCAACAAGAGCAGGAGAAGGACAAGAATGCCAAATTAGAGGAGTCTAAACCAATTAAAATTGTTTCAGGGTCTGTGATTCCTAATCACTCCGTCAAAAAAACAACTGTGGAATCCAAGGCTAATGATACAGAGAAAACTTCCCAGGCTGGTTCTAGTGGCAAACTTGCCTTTAGTTTAAAACAGAAGTCAAAATTAGTTCCGCCGCCTGTTAAGTTAAGTGCTGAAGAAGAGGATGAAGAAGAAACAAATGCCAGTGATTTTTCAGGTGATGTACCGTTGAAACGGCAGAAGTTGGATTCTGGGGGTTGCACTGATCCATTGAGACAGCTTGAAGTTGCACCTCTGTCCCCAAGTGACCCTACAGTGAAGAAAGTGGCTGACAAACTAGCAAGTTTTGTGGCTAAAAATGGAAGGCAATTTGAGGATGTTACACGTCAAAAAAATCCTGGGGATACACCTTTCAAATTCTTGTTTGACGAGAAATGCGCTGACTACAAGTATTATCAATATCGGCTTGCTCAAGAGGAAAAGACTCTTGCACAGTCAAGGGAGACACGGGTATCGCATAATGGTGGTACAAGCACTTCATCTTCCAGACCAACATCTGGTTCTCAGAGAACACCTCAGCAGCATTCAACTTACCAAACTCCTGCTTCTGCTTTATATGAAAGTACTGATGAGCCTGGTGCATTGTCTAATGCTGATTCATTAGCACGAATGGAGTTCTACATGAAGAAAGCTGCAGAGGAAGAGAAGATGAAACAGCCTAAGCAGTCAAAAGATGAGATGCCTCCTCCAGCTTCTCTTCAAGCTCCAGGGAAAAAGGGTCATCACATGGGTGATTACATCCCTCCGGAAGAACTGGAGAAGTTCTTGGCTAACTGCAACGATGCAGCAGCCCAGAGAGCTGCCAGGGAGGCTGCAGAGAAGGCTAAAATTCAGGCTGATAATGTGGGCCACAAGCTCTTGTCAAAAATGGGTTGGAAAGAAGGTGAGGGGCTGGGCGGCTCCAGGAAGGGTATATCAGATCCAATAATGGCAGGCAATGTTAAAATGAATAACTTGGGAGTTGGTGCTCAGCAACCGGGGGAGGTGACTCCTGAAGATGATATATATGAGCAATACAAGAAGCGGATGATGCTCGGTTATCGTTACAGACCAAACCCTCTGAACAATCCTCGCAAGGCTTATTATTGA 1563 0.4479 MLVTATSTMRLIQLRHIITISPSTDGPLLPGHPPFSLLWSSLETESDSAFASESVYFNSGCCVISCWRFANAESVVIDHCYHCIVGQYVWILILVNTAARFIGVPPSLFVNDGSFMERFKQLQQEQEKDKNAKLEESKPIKIVSGSVIPNHSVKKTTVESKANDTEKTSQAGSSGKLAFSLKQKSKLVPPPVKLSAEEEDEEETNASDFSGDVPLKRQKLDSGGCTDPLRQLEVAPLSPSDPTVKKVADKLASFVAKNGRQFEDVTRQKNPGDTPFKFLFDEKCADYKYYQYRLAQEEKTLAQSRETRVSHNGGTSTSSSRPTSGSQRTPQQHSTYQTPASALYESTDEPGALSNADSLARMEFYMKKAAEEEKMKQPKQSKDEMPPPASLQAPGKKGHHMGDYIPPEELEKFLANCNDAAAQRAAREAAEKAKIQADNVGHKLLSKMGWKEGEGLGGSRKGISDPIMAGNVKMNNLGVGAQQPGEVTPEDDIYEQYKKRMMLGYRYRPNPLNNPRKAYY 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2688 520 SMART surpneu2 245 299 IPR000061 GO:0003723|GO:0006396
Bisa02g2688 520 MobiDBLite consensus disorder prediction 306 344 - -
Bisa02g2688 520 ProSiteProfiles G-patch domain profile. 437 484 IPR000467 GO:0003676
Bisa02g2688 520 SUPERFAMILY Surp module (SWAP domain) 226 298 IPR035967 GO:0003723|GO:0006396
Bisa02g2688 520 Pfam Surp module 246 296 IPR000061 GO:0003723|GO:0006396
Bisa02g2688 520 Pfam G-patch domain 438 481 IPR000467 GO:0003676
Bisa02g2688 520 ProSiteProfiles SURP motif repeat profile. 247 290 IPR000061 GO:0003723|GO:0006396
Bisa02g2688 520 MobiDBLite consensus disorder prediction 371 399 - -
Bisa02g2688 520 Coils Coil 116 136 - -
Bisa02g2688 520 MobiDBLite consensus disorder prediction 301 357 - -
Bisa02g2688 520 Gene3D Surp module 196 303 IPR035967 GO:0003723|GO:0006396
Bisa02g2688 520 MobiDBLite consensus disorder prediction 153 177 - -
Bisa02g2688 520 MobiDBLite consensus disorder prediction 189 224 - -
Bisa02g2688 520 MobiDBLite consensus disorder prediction 163 177 - -
Bisa02g2688 520 PANTHER ARGININE/SERINE RICH SPLICING FACTOR SF4/14 106 520 IPR040169 -
Bisa02g2688 520 SMART G-patch_5 435 482 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2688 Bisa-ChrBisa02 68141146 68148951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2688 428 520 C2H2 Transcription Factor Family AT5G26610 34.259 7.66e-09 55.5