Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2669 ATGTATTTGCCAAAACACGCTAGCATGAAGATCAGCGATTTGTGCAATGTGCGAAGAAGAGAGACTCGTGATTTGGGGTTTTCTATCGGAGCATTCCAAGGAATAAATCCTCAGCTGTATGGAATGCAGCATGCTAGAATGCCTTTGCCTCTTCAAATGGAAAAGAAGCCTGTTTATGTCAGTGCAAAGCAGTATCATGGAATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGCTTGAAAAGAAAATTATCAAAGTCCGAAAGGGTCGCTTTCTCAATACAAAGAAGCTCGACAGCAACAATTCCAATGCCACTCTAGAAAAAGGTAAGAACACTGGCGCCAACCCCTCGGCAACATCTGGAAGCTCACCCGCCTCCGAATGCTCAGAATTGGATGAGTTCAGTATTAGAAACTCTTTGGTATTTGGTAATGGTTTACTTGCTTATCTCTCAAGTCTAACAAAAGGATCACATTTTGCAGGTGAAGAAGAAACTTGTCTCGTCCAGCTTGGAGGAAACCACCCTCATATTGCAGCATAG 543 0.4365 MYLPKHASMKISDLCNVRRRETRDLGFSIGAFQGINPQLYGMQHARMPLPLQMEKKPVYVSAKQYHGILRRRQSRAKAELEKKIIKVRKGRFLNTKKLDSNNSNATLEKGKNTGANPSATSGSSPASECSELDEFSIRNSLVFGNGLLAYLSSLTKGSHFAGEEETCLVQLGGNHPHIAA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2669 180 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 56 89 IPR001289 GO:0003700|GO:0006355
Bisa02g2669 180 ProSiteProfiles NF-YA/HAP2 family profile. 54 89 IPR001289 GO:0003700|GO:0006355
Bisa02g2669 180 Gene3D - 55 100 - -
Bisa02g2669 180 SMART cbf3 53 95 IPR001289 GO:0003700|GO:0006355
Bisa02g2669 180 MobiDBLite consensus disorder prediction 97 128 - -
Bisa02g2669 180 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 33 89 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2669 Bisa-ChrBisa02 67757372 67762921 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2669 32 124 CCAAT-HAP2 Transcription Factor Family AT1G30500 41.964 6.93e-21 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa02g2669 CBFB_NFYA 5.6e-09 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2669 02 67757372 67762921 Bisa02g2669 02 67757372 67762921 ECH