Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2667 ATGATGATCCCATCAGTGCGTCTTCCGGGACCGACAACGTGGCAGCTGGATGGGCCTTCTGTGGGCCCTACTTCTGTCGCTTATGATTGGGACACGTTGGAAAACTTGTGTAAGATGCCAGGAAAACCTGAGGTCGAAGATAGGAGGTTTGAAGGTGGAGGGCAGATTCAGTTTCCATCGGGCATTTACTCTCGGCCTTGGTGGCGTGGAGTGCAGGAAAATGACTCCAAATCTTCTTCTTCAACAGATCAGCTAAGTGGTTCAGTCATGAATACAGTAGCCAATGGAGGGGCTGAAAATGGAGTTGATTTCAATAAACAGACTCAGCCTATGCTTTCACCTTCACTTTCTGCAGCTGGTGGAAATGCTGCCAAAGAGCACCAAAGCATCAAACCTGTTATGTCATCGACACCACTTACCATGGGCAAACACCTTGGTCCAAATTCCCATGTTGAACTTGTTGGTCATTCAATTGTTTTAACCTCTTACCCTTACTCAGATGCACAGTATGCTGGAATCTTGACAACACATGGGCCTCAAACCATGGTATGCTATTTCCAGTATGTCTCACTTCAACATGTCTTTCTTTTTATAAATCCTCAGCTGTATGGAATGCAGCATGCTAGAATGCCTTTGCCTCTTCAAATGGAAGAGGAGCCTGTTTATGTTAATGCAAAGCAATATCATGGAATTTTGAGGCGAAGGCAGTCACGTGCTAAGGCTGAGCTTGAAAAGAAAATTATCAAAGCCCGAAAGCCATATCTTCACGAATCCCGTCACCTCCATGCTATGAGGAGGGCAAGGGGTTGTGGGGGTCGCTTTCTCAATACAAAGAAGCTCGACAGCAACAATTCCAATGCCACTCTAGAAAAAAGTAAGAACACTGGTGCAAACCCCTCGGCAATATCTGGAAGCTCACCTGCCTCTGAATGCTCGGTTAACAACAATGAGAAATTTGACCCATCAAACTATCAGCATGGTATATCCGTGTCCATGATTTGGAACATGCAAAATGCAAACTTCTATGGAGCCCCAAATGGGGACTAA 1047 0.4546 MMIPSVRLPGPTTWQLDGPSVGPTSVAYDWDTLENLCKMPGKPEVEDRRFEGGGQIQFPSGIYSRPWWRGVQENDSKSSSSTDQLSGSVMNTVANGGAENGVDFNKQTQPMLSPSLSAAGGNAAKEHQSIKPVMSSTPLTMGKHLGPNSHVELVGHSIVLTSYPYSDAQYAGILTTHGPQTMVCYFQYVSLQHVFLFINPQLYGMQHARMPLPLQMEEEPVYVNAKQYHGILRRRQSRAKAELEKKIIKARKPYLHESRHLHAMRRARGCGGRFLNTKKLDSNNSNATLEKSKNTGANPSAISGSSPASECSVNNNEKFDPSNYQHGISVSMIWNMQNANFYGAPNGD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2667 348 ProSitePatterns NF-YA/HAP2 subunit signature. 222 242 IPR018362 GO:0003677|GO:0016602
Bisa02g2667 348 MobiDBLite consensus disorder prediction 277 317 - -
Bisa02g2667 348 ProSiteProfiles NF-YA/HAP2 family profile. 217 277 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 219 274 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 Gene3D - 217 278 - -
Bisa02g2667 348 SMART cbf3 216 277 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 PRINTS CCAAT-binding transcription factor subunit B signature 220 242 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 PRINTS CCAAT-binding transcription factor subunit B signature 251 274 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 75 322 IPR001289 GO:0003700|GO:0006355
Bisa02g2667 348 MobiDBLite consensus disorder prediction 274 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2667 Bisa-ChrBisa02 67708955 67720141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2667 163 306 CCAAT-HAP2 Transcription Factor Family AT1G30500 51.389 1.50e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Bisa02g2667 CBFB_NFYA 1.3e-26 No_clan