Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2663 ATGTGCGGTGGTCCGGATAAATCAAAATCTCCATCAACTCCATCTTCGTCAACTGTAGAAGGTGCAACTAACATGAAAGACATGAAAAACCTAACTGTTCATACCGAAGATTCTTTTTCCAGCTTACTGGAACTTGCTTCTAACAATGATATTGAAGGATTTAAGCTACTGTTGGATAGGGATGCTTCTTCAATAAATGAAGTTGGGCTCTGGTATTGTCGCCAAATTGGTTCGAAACAAATTCTTCTGGAGGATAGAACTCCATTGATGGTTGCTGCTACGTATGGTAGTATTGATGTTCTGAAGCTTATACTCTCATATTCGGAGGCTGATGTTAATTTCTCATGTGGGATAAGTAAGAGCACTGCCCTTCACTGTGCTGCATCTGGTGGTTCTGTTAATGCAGTTGAAGTTGTGAAGCTTCTTTTAGCTTCTGGTGCTGATCCCAATTGCATGGATGCTATTGGAAGTCGTCCTGCTGATGTTATTGTTGTTCCTCCCAGGCTGCAAGGCATGAAAGCAACACTGGAGGAACTTCTTTCTGATAATGCATCTGATGACTCAGCAGGTGATTCGACTACTCCTCCAGTTCCTGTTAAGTCATCAAGTCCTGGTTTGCCTGCCCATTTATTATCTCCTGAGAATGGGCTGCCATCATCTCCTTCAGGCTCACCATCTTCTCCAGTGGCGTCAAAGTTCACTGATGCACCTGTTAGCTCTACCTCAGAGAAGAAGGAGTATCCAATTGATCCATCGCTTCCTGATATAAAAAACAGCATCTATGCAACAGATGAGTTTCGAATGTTCTCATTTAAGGTTCGTCCTTGTTCCCGTGCATACTCTCATGATTGGACCGAGTGTCCTTTTGTGCATCCAGGAGAGAATGCTCGAAGGAGAGACCCCCGAAAATTCCATTACAGCTGTGTACCATGCCCTGATTTTCAGAAGGGGGCTTGTAGACGGGGGGATATGTGTGAATATGCACATGGAGTATTTGAATGCTGGCTACACCCGGCTCAGTATCGCACACGGCTGTGCAAAGATGGCACCAATTGCAATAGACGGGTGTGTTTTTTTGCTCACACAGCTGAAGAGTTGCGTCCACTGTATATGTCCACTGGATCAGCTGTCCCTTCTCCACGAGCATCTGCCTCTGCTGCCAATGTCATGGATATGGCTGCTGCAATGAACCTATTGCCTGGCGGTTCTCTTTCATCAGTGTCTTCCATGTCTCCGTCCCACTTTGCCCAGCCGATGTCTCCATCTGCCAATGGCATTTCACACTCATCTGGGGCTTGGCCGCAGTCCAATGTGCCAGCGCTTCATCTACCTGGAAGTAACCTTCAATCTAGTCGATTGAGGTCTTCTTTTAGTGCTCGAGACATTCCACCTCAAGACTTGAACATGTTGCCTGATTTTGATAGCCAGCAACACCATTTGAATGATTTAGGCTGTTTCTCACAGCCCCGACCTGGTGCCATATCGGTGAACCGATCTGGTCGGTCTAAGACACTAACTCCATCAAATCTTGAAGAGCTGTTTTCTAATGAAATTTCCTCATCTCCCCGATATTCTGATCCAGCATCAGCATCTGTTTTTTCTCCTACACATAAATCAGCTGTTCTCAATCAGTTTCAACAGCTTCAAAGTATGTTATCACCCATTAACACAAATGTCATGTCTCCTAAGAATGTTGAGCATTCTCTATTGCAGGCTCCATTTAGTGTCTCTTCTCCAGGAAGGATGTCGCCAAGAAGTGTGGATCCTATATCTCCCATGGGCTCTCGTTTATCTCCATTTGCTCAGCGTGAGAAACAGCAACAGCTGCGGAGCCTTAGTTCAAGGGACCTGGGTTCCAAAAATCCTGCATCAGTTGTCGGATCCCCTGTGAACGGTTGGTCTAATTGGGGGTCTCCAACTGGAAAAGTTGATTGGTCAATTAATGGAGATGAATTAGGTCGATTGCGAAAATTATCTTCACTGGAGCATGGGAACAATGGGGAAGAACCTGATCTATCATGGGTCCAATCTCTTGTTAAGGAATCCCCACCTGAGATGGTAAAAGAGAAGTTGGCAGCCTCTGGCCCCATCGCATCTGCTGATAAACTTAACTCCATATCTCGAATTGAATCCGTTGATAATTCTGTTATAGGAGCATGGCTCGAGCAAATGCAACTGGATCAGCTCGCAGTCTAG 2196 0.4545 MCGGPDKSKSPSTPSSSTVEGATNMKDMKNLTVHTEDSFSSLLELASNNDIEGFKLLLDRDASSINEVGLWYCRQIGSKQILLEDRTPLMVAATYGSIDVLKLILSYSEADVNFSCGISKSTALHCAASGGSVNAVEVVKLLLASGADPNCMDAIGSRPADVIVVPPRLQGMKATLEELLSDNASDDSAGDSTTPPVPVKSSSPGLPAHLLSPENGLPSSPSGSPSSPVASKFTDAPVSSTSEKKEYPIDPSLPDIKNSIYATDEFRMFSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFQKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTNCNRRVCFFAHTAEELRPLYMSTGSAVPSPRASASAANVMDMAAAMNLLPGGSLSSVSSMSPSHFAQPMSPSANGISHSSGAWPQSNVPALHLPGSNLQSSRLRSSFSARDIPPQDLNMLPDFDSQQHHLNDLGCFSQPRPGAISVNRSGRSKTLTPSNLEELFSNEISSSPRYSDPASASVFSPTHKSAVLNQFQQLQSMLSPINTNVMSPKNVEHSLLQAPFSVSSPGRMSPRSVDPISPMGSRLSPFAQREKQQQLRSLSSRDLGSKNPASVVGSPVNGWSNWGSPTGKVDWSINGDELGRLRKLSSLEHGNNGEEPDLSWVQSLVKESPPEMVKEKLAASGPIASADKLNSISRIESVDNSVIGAWLEQMQLDQLAV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2663 731 Gene3D - 15 196 IPR036770 -
Bisa02g2663 731 SUPERFAMILY Ankyrin repeat 33 163 IPR036770 -
Bisa02g2663 731 MobiDBLite consensus disorder prediction 575 633 - -
Bisa02g2663 731 Gene3D - 305 368 - -
Bisa02g2663 731 MobiDBLite consensus disorder prediction 183 250 - -
Bisa02g2663 731 FunFam Zinc finger CCCH domain-containing protein 66 263 331 - -
Bisa02g2663 731 ProSiteProfiles Ankyrin repeat region circular profile. 119 153 - -
Bisa02g2663 731 SMART c3hfinal6 305 331 IPR000571 GO:0046872
Bisa02g2663 731 SMART c3hfinal6 340 363 IPR000571 GO:0046872
Bisa02g2663 731 MobiDBLite consensus disorder prediction 8 25 - -
Bisa02g2663 731 PANTHER UNKEMPT FAMILY MEMBER 44 682 IPR045234 -
Bisa02g2663 731 PRINTS Ankyrin repeat signature 85 100 IPR002110 GO:0005515
Bisa02g2663 731 PRINTS Ankyrin repeat signature 138 152 IPR002110 GO:0005515
Bisa02g2663 731 Pfam CCCH-type zinc finger 310 330 IPR041367 -
Bisa02g2663 731 Pfam Ankyrin repeats (3 copies) 46 153 IPR002110 GO:0005515
Bisa02g2663 731 SMART ANK_2a 119 151 IPR002110 GO:0005515
Bisa02g2663 731 SMART ANK_2a 84 114 IPR002110 GO:0005515
Bisa02g2663 731 SMART ANK_2a 37 67 IPR002110 GO:0005515
Bisa02g2663 731 MobiDBLite consensus disorder prediction 215 241 - -
Bisa02g2663 731 MobiDBLite consensus disorder prediction 1 25 - -
Bisa02g2663 731 MobiDBLite consensus disorder prediction 183 199 - -
Bisa02g2663 731 ProSiteProfiles Zinc finger C3H1-type profile. 310 332 IPR000571 GO:0046872
Bisa02g2663 731 ProSiteProfiles Ankyrin repeat profile. 119 154 IPR002110 GO:0005515
Bisa02g2663 731 MobiDBLite consensus disorder prediction 600 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2663 Bisa-ChrBisa02 67597886 67600081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2663 1 728 C2H2 Transcription Factor Family AT5G12850 54.301 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa02g2663 Ank_2 3.6e-11 CL0465