Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2658 ATGAAGAATAACAATAACAACAGTAATAATAAGAGGAAGCTGAGGAAGGGGTTGTGGTCACCAGAGGAAGACGAGAAGTTGATCAGGTACATGTTGAAGAACGGACAAGGGTGTTGGAGTGATATTGCCAGAAATGCAGGCCTTCTTCGCTGTGGCAAAAGCTGTCGTCTTCGTTGGATCAATTATCTCAGACCTGACCTCAAACGTGGTGCTTTTTCGCCCCAAGAAGAACACCTCATCATCCATTTCCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCTGGAAGAACAGACAATGAGATTAAGAATTTCTGGAACTCCACATTGAAGAAAAGGTTAAAAAATAACACTCCCACTGATCCATCACCCAACAACTCATCATCAGAGCCAAATCAAATTGAAGATCAAGTTCTGGGTTTGAATTCAAATAAGAACCCATTAACCTTCATGGATTCTTCTTCTTCCTCCTCCTCCTCCTCTTCATCATCATCATCCATGCAAATACCCATGATTTTCGGAGACCAACTACTATTTGATCCCTTTTCCATGTTTGATCACCGTTTTGACATGAGCAACAACAACAACAAGAGCAACAACGTTGGAGCCTGTAATTTTCCTATGTCTGCGCAAGCTGGCTTTATGGAAGATGGGGTTTATGATAATGGGGATCATGGGATATTATCAGAGTCCAAAAATAATCATAATCATTACAATAATATGGGCTTAGGGAGTAGCATGAGAATTCGAAGCAATGATATTGAAGACAATAGTATCCCAAAAAGTCAGTCCAACCACTTCAATAATAGTTGCTTCACTTTCACTGATGATCTTCACATAATTCAAACCTCCAAACCAGAAGAAGACTTGTTTGCCTTTGGAAATATTAATCACAATCATAATAATGGGGAATTAGGAGAAAACTTATTGGGAGATCAATGGGATTTGGAAGGTTTGATGCAAGACATGTCTTCTTTTCCTTTCCATGATTTTTCCAAGTTAGTTGAATAA 1023 0.3949 MKNNNNNSNNKRKLRKGLWSPEEDEKLIRYMLKNGQGCWSDIARNAGLLRCGKSCRLRWINYLRPDLKRGAFSPQEEHLIIHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRLKNNTPTDPSPNNSSSEPNQIEDQVLGLNSNKNPLTFMDSSSSSSSSSSSSSSMQIPMIFGDQLLFDPFSMFDHRFDMSNNNNKSNNVGACNFPMSAQAGFMEDGVYDNGDHGILSESKNNHNHYNNMGLGSSMRIRSNDIEDNSIPKSQSNHFNNSCFTFTDDLHIIQTSKPEEDLFAFGNINHNHNNGELGENLLGDQWDLEGLMQDMSSFPFHDFSKLVE 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2658 340 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bisa02g2658 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bisa02g2658 340 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bisa02g2658 340 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bisa02g2658 340 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Bisa02g2658 340 FunFam MYB transcription factor 13 69 - -
Bisa02g2658 340 FunFam Transcription factor MYB46 70 141 - -
Bisa02g2658 340 Gene3D - 70 142 - -
Bisa02g2658 340 PANTHER MYB DOMAIN PROTEIN 55 8 274 - -
Bisa02g2658 340 MobiDBLite consensus disorder prediction 149 171 - -
Bisa02g2658 340 CDD SANT 71 114 IPR001005 -
Bisa02g2658 340 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bisa02g2658 340 SMART sant 15 65 IPR001005 -
Bisa02g2658 340 SMART sant 68 116 IPR001005 -
Bisa02g2658 340 MobiDBLite consensus disorder prediction 117 137 - -
Bisa02g2658 340 CDD SANT 19 63 IPR001005 -
Bisa02g2658 340 Gene3D - 13 69 - -
Bisa02g2658 340 SUPERFAMILY Homeodomain-like 14 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2658 Bisa-ChrBisa02 67402104 67404630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2658 9 335 MYB Transcription Factor Family AT3G08500 45.115 6.76e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g2658 Myb_DNA-binding 1.7e-13 CL0123