Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2647 ATGACAGATCCTCAGCAGTACTCATGCTTCAACTTCATGCCCCTTCTTCACTCTCCTCTCTACTCTAATTCTTTCCCTACTTCTCAATCCAACACCTGTAATTCTGGCTTCTACCCTCTTCATCATCCTCAGTGCTCTGATAGCAATATCACATCATCATCTTTATCCTCCGTTCAATTCCAGGCCTCTCCTAATTCCCCTCCTCTTAAGGAAGCCCTCCCCCTCCTAAACAACCTAAGCCTCACAACAAATTATGATGGACCCTCAAAAAGTAATGCACTTCTAGAAGAAGAGAACAAGAAAACGGACAAAGAAGACGATGAAGAAGAAGAAGATAATGATGATGATGATAGAGCCGCTAGTGTGACTGTAGCCCTAGGCATAGGGCTTCCTTGCATGACCAGTACTCCTTCTTCTTCTTCTTCTTCGTCTCATAAGCAGATCTCAAATTCCATGGAAATGGCTGAAAAAGACGAACTTGGTGTGGTCTCTGGATACCCTTTGGAAAGATTAAACAAGGTTCAGTATTGGATTCCCACCCCATCTCAGATTCTCATTGGCCCTACACAGTTCTCTTGCCCTGTGTGCTCCAAGACTTTCAATAGATACAATAATCTTCAGATGCACATGTGGGGGCATGGATCTCAATACAGAAAAGGACCAGACTCTCTACGAGGGACACAGCCCTCAGCCATGCTGAGGCTTCCATGCTTCTGTTGTGCACCAGGGTGCAAGCACAACATAGAGCACCCAAGAGCCAGGCCTCTCAAGGACTTCAGAACCCTTCAGACTCACTACAAGAGGAAGCATGGCATCAAACCCTACATGTGCAGAAAGTGTGGGAAGGCCTTTGCTGTGAAAGGTGACTGGAGGACACATGAGAAGAACTGTGGCAAGATATGGTATTGTCTCTGTGGCTCTGATTTCAAACACAAGAGGTCCCTCAAAGACCATGTCAAGGCCTTTGGACATGGCCATGGAGATTTTGGGATTGACTGCTTGCAAGAGGAAGATGAAGCTGCCTCTGAGATTGAACAAGATGGGGAGAATTACTCAATGTGA 1062 0.4595 MTDPQQYSCFNFMPLLHSPLYSNSFPTSQSNTCNSGFYPLHHPQCSDSNITSSSLSSVQFQASPNSPPLKEALPLLNNLSLTTNYDGPSKSNALLEEENKKTDKEDDEEEEDNDDDDRAASVTVALGIGLPCMTSTPSSSSSSSHKQISNSMEMAEKDELGVVSGYPLERLNKVQYWIPTPSQILIGPTQFSCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLRGTQPSAMLRLPCFCCAPGCKHNIEHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHVKAFGHGHGDFGIDCLQEEDEAASEIEQDGENYSM 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2647 353 ProSitePatterns Zinc finger C2H2 type domain signature. 193 213 IPR013087 -
Bisa02g2647 353 Coils Coil 92 112 - -
Bisa02g2647 353 FunFam Zinc finger protein WIP2 244 326 - -
Bisa02g2647 353 SMART c2h2final6 191 213 IPR013087 -
Bisa02g2647 353 SMART c2h2final6 301 324 IPR013087 -
Bisa02g2647 353 SMART c2h2final6 275 295 IPR013087 -
Bisa02g2647 353 MobiDBLite consensus disorder prediction 84 119 - -
Bisa02g2647 353 FunFam zinc finger protein WIP2-like 190 213 - -
Bisa02g2647 353 Gene3D Classic Zinc Finger 244 326 - -
Bisa02g2647 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 275 295 IPR013087 -
Bisa02g2647 353 PANTHER ZINC FINGER PROTEIN WIP2 38 349 IPR043584 GO:0003700|GO:0010468
Bisa02g2647 353 ProSiteProfiles Zinc finger C2H2 type domain profile. 191 218 IPR013087 -
Bisa02g2647 353 Pfam Zinc finger, C2H2 type 191 210 IPR013087 -
Bisa02g2647 353 MobiDBLite consensus disorder prediction 102 117 - -
Bisa02g2647 353 SUPERFAMILY beta-beta-alpha zinc fingers 259 295 IPR036236 -
Bisa02g2647 353 SUPERFAMILY beta-beta-alpha zinc fingers 185 213 IPR036236 -
Bisa02g2647 353 Gene3D Classic Zinc Finger 190 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2647 Bisa-ChrBisa02 67212635 67215807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2647 69 353 C2H2 Transcription Factor Family AT3G57670 58.095 4.50e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g2647 zf-C2H2_6 9.5e-05 CL0361