Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2643 ATGGATCCACAAGAGGGAGGACCTGCTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGGTAGAAGGGGGAACTTATCTAAAAAGGACCACATCTTGAAGATTGTGAAAGGAATTCTAAATAAGCTGACTCTTGAGAAATTTGATCTCCTAAAGGGTCATTTGATTGTTTCTAGGATTACATCGGCTGACATCTTAAAGGGAGTCATTTCACTTATATTTGATAAGGCTGTACTAGAATCGACGTTATGCCCAATGTATGCTCAACTTTGTTCAGATCTTAATGAAATGTTGCCTCCATTCCCATCTGATGAGCCTGGTGGGAAAGAAATCACTTTCAAACGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGATATTGAATTTAGGGAAGAAGTCGAGCATATAATTATTGCTGAACGGGAAAATGAGCGTAGGGATATGGAAAGACTTGTTAAGCTTCGTACTCTTGGGAATATCCGTTTAATTGGGGAGCTGTTGAAGCAAAAGATGGTTCCTGAAAAGATTGTTCATCATATTGTTCAAGAACTTTTAGGACCTCCTAATAGGAAGTCCTATCCAGTTGAGGAAAACATTGAAGCCATATGCGAGTTTTTCAATACTATTGGAAAGCAACTTGATGAAAGCCCAAAATCAAGGCGTATTAATGATGTATACTTTAGCCGATTGGAAGAACTGAGCTCAAACCCCCAGCTAGTATCACAATTGAGGTTCATGGTTCGCAACATTATAGACTTGCGTGCTAATAACTGGGTTTCGAGACATGAAGAAGAGGTTGTTAAGATCGATCAAGGGACAAATAATTTCAGCGAGATAATTAGGAAGGTAATATTGGCTGGGGGATTAGAGTTTAAGGTGGTCAGAGAAATCCTTAAGAAAGTGGAATATGACTTCCTCCAGGTGCCATGGTCAGGTAAAAGGAGGAGCCTATCTAAAAAGGACTGCATTTTGAAGATTGTGAAAAGAATTATAAATAAGCTGGCTCCTGAAAAATTTGATCTCTTAAAGGGTCATTTGATTGTTTCTGGAATTACATCGGCTGACATCTTGAAGGGAGTCATTTCGCTTATATTTAATAAGGCTGTACTAGAACCGACATTTTGCCCGATGTATGCTCAACTTTGTTTCGATCTTGATGAAAAGTTGCCTCCATTCCCATCTGATGAACCGGGTGGGAAAGAAATCACTTTCAAACGAGTACTCTTGAATACATGCCAAGAGGCTTTTGAAGGTGCTGTTAAATTGAGGGAAGAAGTAAAGCATATAACTGCTACTAAACAGGAAAACGAGCGTAGGGATATGGAAAGACTTGTTAAGCTTCGTAATCTTGGGAATATCCGTTTAATTGGGGAGCTGTTGAAGCAAAAGATGGTTCCTGAAAAGATTGTTCATCATATTGTTCAGGAACTTTTAGGACCTCTTGATTGGAAGTCATGTCCAATTGAGGAAAACGTTGAAGCCATATGTGAGTTTTTGAATACCATTGGTAAGCAACTTGATAAAAGCCCAAAATCAAGGCGTATTAATGATGTATACTTTAGCCGATTGGAAGAATTAAGCTCAAACCCCCAGCTAGTATCACAATTGAGGTTCATGGTTCGCGACCTTCTAGACTTGCGTGCTAATAATTGGGTTTCGAGACGTGAAGAGGTAGACTAA 1686 0.3968 MDPQEGGPAPTLVKAEVPWSGRRGNLSKKDHILKIVKGILNKLTLEKFDLLKGHLIVSRITSADILKGVISLIFDKAVLESTLCPMYAQLCSDLNEMLPPFPSDEPGGKEITFKRVLLNICQEAFEGDIEFREEVEHIIIAERENERRDMERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPNRKSYPVEENIEAICEFFNTIGKQLDESPKSRRINDVYFSRLEELSSNPQLVSQLRFMVRNIIDLRANNWVSRHEEEVVKIDQGTNNFSEIIRKVILAGGLEFKVVREILKKVEYDFLQVPWSGKRRSLSKKDCILKIVKRIINKLAPEKFDLLKGHLIVSGITSADILKGVISLIFNKAVLEPTFCPMYAQLCFDLDEKLPPFPSDEPGGKEITFKRVLLNTCQEAFEGAVKLREEVKHITATKQENERRDMERLVKLRNLGNIRLIGELLKQKMVPEKIVHHIVQELLGPLDWKSCPIEENVEAICEFLNTIGKQLDKSPKSRRINDVYFSRLEELSSNPQLVSQLRFMVRDLLDLRANNWVSRREEVD 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2643 561 FunFam Eukaryotic translation initiation factor isoform 4G-2 24 260 - -
Bisa02g2643 561 SUPERFAMILY ARM repeat 26 261 IPR016024 -
Bisa02g2643 561 SMART if4_15 326 552 IPR003890 GO:0003723|GO:0005515
Bisa02g2643 561 SMART if4_15 33 259 IPR003890 GO:0003723|GO:0005515
Bisa02g2643 561 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 12 273 IPR045208 GO:0003743
Bisa02g2643 561 FunFam Eukaryotic translation initiation factor isoform 4G-2 317 553 - -
Bisa02g2643 561 SUPERFAMILY ARM repeat 320 554 IPR016024 -
Bisa02g2643 561 Coils Coil 421 441 - -
Bisa02g2643 561 Gene3D - 24 261 - -
Bisa02g2643 561 Gene3D - 317 554 - -
Bisa02g2643 561 Pfam MIF4G domain 326 552 IPR003890 GO:0003723|GO:0005515
Bisa02g2643 561 Pfam MIF4G domain 33 259 IPR003890 GO:0003723|GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2643 Bisa-ChrBisa02 67101054 67113811 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2643 309 560 Eukaryotic Initiation Factors Gene Family AT5G57870 71.032 1.52e-114 356