Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2629 ATGAGCGCACCACCGACCCCTTGCCCTAACCTTCCCTCCCCATTCGCCGGAGAGCTCTCGCCAGAAGCTTTGCCGATCAACCGCCGACGCATTCGTCTCTGGTCCAGCGACGATCTCCATTCGTATGGAGGTAAGAATGTCTGCAAGGATTCGAATCTGAATCGATCGTCTTCTTCTTCGCACCGAAGCTTCTACTACAAACCCGAGAATGTTCGGAAAGGATTGCTTTCTTCATCGTCTTCGGCGTCCAGGTATGACAGGGATCGAACCGTGGATGAGGATCGGGATGGCTCCAGGTTGGTACGGAAGCGATCAGACCATGACTTTGAGAATTTTGATCGGAGAAAGGGTTTTGATCGTTATAGGGACAGTGGGGATAGTAGAGGGTATGGGTCTGGAGGAGATAGGAGTTTGATTCAGAGGTCGGAGAGTTTTTGCGGGACTAGGAGGGATTTTCCCAAGGGCTTTCGGTCTGAGAGAGACCGGTCACGGCGGGAAGGCAGTGTATCTTCGTGGCGGAGATTTGGTAGTGGGTTGAAGGATTTTGATGACAGTGTTAGAGGGAGCAGGGTTGGACTAGAAGACAGAGGAGTGCGGTCTCCAAAGGGTGTGAGGGATGTTGTGAAATCGCCAACGTGGTCAAAAGACTCTGAGAGTGAGCAGTCTAAGATGAGGTCACCTCCAAGAGGGTCAAGAGATGCGAAGTCAAAGTCGAAGTCACCATCTTGGTCCAAGGATTCAGAGAGTGAACAATCGAAGAGTGAGCAGTCGAAGAGTGAGCGGTCAAAGAGTGTTGAGGTGAAAAAAACAGAGGAGTTGCAGGTTGAGAGTCATAGTAGTAGTAGTGAAATGGAAGAAGGAGAGCTGGAACCTGAGCCCATGCCTGAAACTGAACCAGAAAAGGCTTGTAAAGCTGCACCTGAAAATGAAAACCAGACTTCTATTCCTCTGGATGCTGATGAAAAGGAAGTCCAGACTGAAAACCAGCACAATGATACAAATGCTACTAAGTGTGAAACATCAGAAGAATCAAATAAAGAAGAGACAAAACCTAATGAGGACACCCACTCTGGGGAAAAGAATGTGGAGAAAGAATCCGATAAGTTACCAGATGCTCGGAATGATGTAACTGAAAAAATGCATGATACTGGAAATGAAATTGAGACTGTCGTTCATGATGATGACAAGGAAGATGAGAATTTGAAAGTTGATCCTGAACATGAGGAAGAAACAAAGGAAGTTGCAGATCTCGAGAAGTCATTATCTCATGAAGAGGAGCATGAGCATGATAAGAGTGCAGATCTTGAAACCAAGGCAGACTCTGGCAAACCAGAGTTAAACATTGAAGTTTCAACAGAAAATGAAGTGCATAAAACGGATGGAGAAATAATGATGGAGACTATGACCAACAATGTGAAGGATAAAGGCAAAGGCGTCTCCGTTACACCTACTGATGTTGTTCATTCGGCAGAAGATGGTTTGTGGAATGAAACGGGATTGAGAGATCCCTCGACATGCTCTGGTGATGCTATGGAAGGTCCAAGCACAAGGGGATTTGAGTTGTTTTCCCGATCCCCTGTTAGGAAAGTGGAGAAAACTGACCAATCAAATCTCCACAAGCAGGAAGATGTAAGTCTTTCAATGGAGGGCCTTGATCTTTCTCTTAGCTTGCCAAATGTTTTGTTACCTATTGGTGCTCATGAGACTACGGCTGTCCCTGGATCCCCCAGTCAAGCACGTAGTGTGCAGTCTTTAAGTGCTACATTCCGGACCAACTCAGAAGGATTTACTGCATCAATGTCTTTTTCAGGTTCTCAATCTTTCTATCATAATCCAAGTTGTTCTTTGACACAGAATTCAGTGGACTATGAGCAATCTGTTGGCAGCCGTCCATTATTTCAGGGAATAGATCAACTTTCTCAAGGAGCTTGGCCAGGCCAGGTTCAGACTGATGCCAAACAGAAAGAAATTCCTTTTTCTCAAGGAACTCTAATGAATGGAAATGGCACTTTTGGCCAGTCTCCAGCAACATGGGGCATTTTAGAAGGTCAAGCTGTGAAGGGTCAACATTCTAGGGTTCTAGAAGGGAGCTCAAAAATGGCCAGTGGACTTGACCGGCAATTGAGTTTTCATAAGCAATTGTCAGGACAGTCAAGGCGCCATGATGATGTTAGATCTCCTTCACAGAGTGTTGGTTCTCATGACATAGGATCAAGTTACAGTTTTGACAAGAAGAGGGAAATGAGAGACAGGAATAGTCGCAATGTACATCGAACTGCTAGCCAGAAGGAACAAGAACAATTTCAGATGGGTGGAATTGAGTTTGTTGAGAGTCTTGAGACAATCATTGTGAGGATAGTTTCTGAACCAGTGCATGCAATGGCTAAAAAGTTTCATGACATGACTGGACAGTCCATTGCATGCTTGAAAGAGACCATACGTGAGATTATGCTCAATGCAGATAAGCGTGGGCAAATACTTACTTTTCAGAAGGTTCTGCAGAACAGGTCTGATATAACCTTAGAGGTCTTACAAAAGTCCCACCGTGTTCAATTGGAAATCTTGGTTGCTTTGAAGACCGGTTTAACTAATTTTCTTCAGCTAGACAACAGCATTTCTTCTTCTGATTTAGCTGAGATTTTTCTGAACTTGAGATGTAGGAATCTCTTGTGTCGAAGTCCATTGCCTGTCGATGAATGTGATTGCAAGGTTTGTGCGCAAAAAAATGGCTTTTGCAGCGTATGTATGTGTCTTGTATGTTTCAAGTTTGACAATGCATCAAATACATGTAGTTGGGTTGGGTGTGATGTTTGTCTCCATTGGTGCCATACAGACTGTGGATTACGTGAATCTTATATTAGAAATGGACATAGTGCTACTGGGGCACAAGGGGTGACTGAAATGCAATTTCACTGTGTTGCCTGTGATCACCCCTCTGAGATGTTTGGTTTTGTCAAGGAGGTATTTCTAAATTTCGCAAAAGATTGGTCAGTTGAAGCTCTAAGCAAGGAGCTTGAATATGTCAAGAGAATTTTTTCTGCTAGCAAAGACATGAGAGGGAGACAGCTGCATGATATTGCTGATAAAATGCTGCTGAGGTTGGCAAATAAGTCTAGCCTTCAAGAGGTTTACAGCCACATCATGTCGTTCCTTTCTGACGGTGATTCTTCCAAATTAGCCATGACGCCGACTATTTCTGGGAAGGAACAAGTTAAGGAAAAGAATGGGGTAGCTGGGCCCAGCCAGGATGCTGCTGCCTGGATGAAATCTATCTATTCAGAGAAGATGCCTCTGTTAGAAAGGCCAGTAAACATCCTTCCTAGTTATGACCGAAATGATAAACGGACTCCAGTACAAGAGTTGCAGATGAATGTCCCAAAGGACTTCTGCTTTGATGAATTAGAGAGTGTAGTAAAAATTAAGCAGGCTGAGGCTAAAATGTTTCAGACACGTGCTGATGATGCCCGAAGAGAAGCTGAAGGCCTGAAACGCATTGCTCTTGCAAAAAACGAGAAAATTGATGAAGAATATGCTGGTCGACTTTCAAAGTTGCGGTTGGGAGAAGCTGACAAAATGCGTAAACAAAAATTGGAAGAACTCCAGGAGTTGGAAAGAGCGCATCTGGAGTACTTCAATATGAAAATGAGAATGGAAGCTGACATTAAAGATCTGTTATTGAAAATGGAAGCTACAAAAAGGAGCCTTGCCATGTGA 3714 0.441 MSAPPTPCPNLPSPFAGELSPEALPINRRRIRLWSSDDLHSYGGKNVCKDSNLNRSSSSSHRSFYYKPENVRKGLLSSSSSASRYDRDRTVDEDRDGSRLVRKRSDHDFENFDRRKGFDRYRDSGDSRGYGSGGDRSLIQRSESFCGTRRDFPKGFRSERDRSRREGSVSSWRRFGSGLKDFDDSVRGSRVGLEDRGVRSPKGVRDVVKSPTWSKDSESEQSKMRSPPRGSRDAKSKSKSPSWSKDSESEQSKSEQSKSERSKSVEVKKTEELQVESHSSSSEMEEGELEPEPMPETEPEKACKAAPENENQTSIPLDADEKEVQTENQHNDTNATKCETSEESNKEETKPNEDTHSGEKNVEKESDKLPDARNDVTEKMHDTGNEIETVVHDDDKEDENLKVDPEHEEETKEVADLEKSLSHEEEHEHDKSADLETKADSGKPELNIEVSTENEVHKTDGEIMMETMTNNVKDKGKGVSVTPTDVVHSAEDGLWNETGLRDPSTCSGDAMEGPSTRGFELFSRSPVRKVEKTDQSNLHKQEDVSLSMEGLDLSLSLPNVLLPIGAHETTAVPGSPSQARSVQSLSATFRTNSEGFTASMSFSGSQSFYHNPSCSLTQNSVDYEQSVGSRPLFQGIDQLSQGAWPGQVQTDAKQKEIPFSQGTLMNGNGTFGQSPATWGILEGQAVKGQHSRVLEGSSKMASGLDRQLSFHKQLSGQSRRHDDVRSPSQSVGSHDIGSSYSFDKKREMRDRNSRNVHRTASQKEQEQFQMGGIEFVESLETIIVRIVSEPVHAMAKKFHDMTGQSIACLKETIREIMLNADKRGQILTFQKVLQNRSDITLEVLQKSHRVQLEILVALKTGLTNFLQLDNSISSSDLAEIFLNLRCRNLLCRSPLPVDECDCKVCAQKNGFCSVCMCLVCFKFDNASNTCSWVGCDVCLHWCHTDCGLRESYIRNGHSATGAQGVTEMQFHCVACDHPSEMFGFVKEVFLNFAKDWSVEALSKELEYVKRIFSASKDMRGRQLHDIADKMLLRLANKSSLQEVYSHIMSFLSDGDSSKLAMTPTISGKEQVKEKNGVAGPSQDAAAWMKSIYSEKMPLLERPVNILPSYDRNDKRTPVQELQMNVPKDFCFDELESVVKIKQAEAKMFQTRADDARREAEGLKRIALAKNEKIDEEYAGRLSKLRLGEADKMRKQKLEELQELERAHLEYFNMKMRMEADIKDLLLKMEATKRSLAM 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 193 285 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 193 445 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 147 169 - -
Bisa02g2629 1237 Coils Coil 407 427 - -
Bisa02g2629 1237 Pfam PHD - plant homeodomain finger protein 886 1009 IPR032881 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 836 851 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1132 1152 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 797 819 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 851 866 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 996 1015 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 1171 1193 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 923 943 IPR004082 -
Bisa02g2629 1237 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 877 898 IPR004082 -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 712 764 - -
Bisa02g2629 1237 Coils Coil 1214 1234 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 739 761 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 120 170 - -
Bisa02g2629 1237 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 87 1235 IPR004082 -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 1 21 - -
Bisa02g2629 1237 Coils Coil 1186 1209 - -
Bisa02g2629 1237 CDD PHD_OBE1_like 916 975 IPR047578 -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 336 443 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 495 519 - -
Bisa02g2629 1237 MobiDBLite consensus disorder prediction 76 97 - -
Bisa02g2629 1237 Pfam Coiled-coil region of Oberon 1110 1225 IPR032535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2629 Bisa-ChrBisa02 66713187 66718019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2629 886 1034 PHD Gene Family AT5G57380 25.503 1.21e-09 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2629 02 66713187 66718019 Bisa02g2629 02 66713187 66718019 ECH