LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g2608	ATGGGAAAAGGAAGTCACAGTAGTGTTCTTCATCTTCTTCTTCTGCCCTTTCTCATCATTCTTTCACAGTATGCGGTCTCATGCCGTGGAAGCAAGCAGACAAGAGTTCATGGGGATTTTCAGAAGTCAAAGCTGAGAGGGGATAATGCAGAAATGGATAAGAGTGATTTTAAAGTGAATGAGATTGACCATAATCTGCATGTTTATCTTCAAGAAGGTATGAAGGAGAAAGATAGGATTTTGAGGCTTCCTGGGCAGCCTGTGGTTAGGTTCTCTCAGTATGGAGGGTATGTGACTGTGGATAAAGAAGCAGGACGTGCGTTTTATTACTATTTCGTTGAAGCTCAACAGAATAAGGAATCTTTACCGCTTCTTCTTTGGCTCAATGGAGGACCTGGATGCTCATCCCTTGCCTATGGAGCAATGCAGGAACTTGGACCCTTCAGAGTACACAGCGATGGCAAAACGCTTTACAAAAACAGATACACATGGAACTATGCTGCAAATGTGTTATTCCTTGAGTCACCTGCTGGAGTGGGATTTTCCTACTCAAACAAATCATCAGATTATGTTAGCAATGGAGATAAAAGAACAGCTGAAGATAATTATGTGTTCTTGTTGAATTGGTTAGAGAGATTTCCAGAGTACAAGAAGAGAGAATTCTATATCACTGGGGAAAGCTATGCAGGCCACTACGTCCCTCAACTTGCTCACACTATTCTGCAACACAACACCACAATCATCAACCTCAAAGGCATCATGATAGGGAACGCAGTGACAAACGACGAAACAGACACAAAAGGAATGTTCGATTTTCTGGGAAGCCATGCGATAATCGCAGATTCAGTGGCTGCAGCGATCGATAAGTTCTGTGATTTCTCCCCAAATGCCACAAAGCAGAGTCGAGAGTGCAATGAAGCAGCCGATGAAGCTCAAAAGTATATTAATGCCATTGACATCTACAACATCTATGCTCCTTTGTGCACCAACCCCAATCTCACTGCTATTCCCAAGAAGAACACTATTGTGATTGATCCATGTAGCGATAATTATGTAACAGCATATCTAAACCGACGTGATGTGCAAGAAGCCATGCATGCCAATGTCACAAAACTCAAGTATGAGTGGTCACCATGCAGTGATGTTATTACAAAATGGGTTGATAGCCCTTCAACTGTTATTCCTCTCTTACAAGAATTCCTCACTCATGGCCTTAGGGTTTGGATTTTCAGCGGAGACATAGATGGGAGAGTGCCAGTTACATCAACCCAATACTCTATTAACAAGATGAACTTAACGGTGAAAACGCCATGGCATCCTTGGATCTTCAATGGAGAGGTTGGTGGATACACACAAGTATACAAAGGAGAGCTAACATTTGCCACAGTAAGAGCAGCAGGGCATCAAGTGCCAAGTTACCAGCCAGCCAGAGCCCTTTCATTGATCAAACACTTCTTAGATGGCACACCTCTTCCTTAA	1479	0.4287	MGKGSHSSVLHLLLLPFLIILSQYAVSCRGSKQTRVHGDFQKSKLRGDNAEMDKSDFKVNEIDHNLHVYLQEGMKEKDRILRLPGQPVVRFSQYGGYVTVDKEAGRAFYYYFVEAQQNKESLPLLLWLNGGPGCSSLAYGAMQELGPFRVHSDGKTLYKNRYTWNYAANVLFLESPAGVGFSYSNKSSDYVSNGDKRTAEDNYVFLLNWLERFPEYKKREFYITGESYAGHYVPQLAHTILQHNTTIINLKGIMIGNAVTNDETDTKGMFDFLGSHAIIADSVAAAIDKFCDFSPNATKQSRECNEAADEAQKYINAIDIYNIYAPLCTNPNLTAIPKKNTIVIDPCSDNYVTAYLNRRDVQEAMHANVTKLKYEWSPCSDVITKWVDSPSTVIPLLQEFLTHGLRVWIFSGDIDGRVPVTSTQYSINKMNLTVKTPWHPWIFNGEVGGYTQVYKGELTFATVRAAGHQVPSYQPARALSLIKHFLDGTPLP	492

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g2608	492	ProSitePatterns	Serine carboxypeptidases, serine active site.	223	230	IPR018202	GO:0004185
	Bisa02g2608	492	Pfam	Serine carboxypeptidase	85	488	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	209	234	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	173	183	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	160	172	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	PRINTS	Carboxypeptidase C serine protease (S10) family signature	458	471	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	FunFam	Carboxypeptidase	74	330	-	-
	Bisa02g2608	492	Gene3D	-	347	384	-	-
	Bisa02g2608	492	SUPERFAMILY	alpha/beta-Hydrolases	83	492	IPR029058	-
	Bisa02g2608	492	Gene3D	alpha/beta hydrolase	74	330	IPR029058	-
	Bisa02g2608	492	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	81	475	IPR001563	GO:0004185\|GO:0006508
	Bisa02g2608	492	Gene3D	-	393	488	-	-
	Bisa02g2608	492	FunFam	Carboxypeptidase	393	488	-	-
	Bisa02g2608	492	FunFam	Carboxypeptidase	345	491	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g2608	Bisa-ChrBisa02	66096157	66103428	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g2608	355	491	Calmodulin-binding Proteins	AT2G22960	30.657	4.43e-17	77.4

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bisa02g2608	02	66096157	66103428	Bisa02g2608	02	66096157	66103428	ECH