Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2600 ATGGCGTGCATAAAAGGGGTAAATCGATCGGCCTCCGTGGCCCTGTCACCGGACGCCCCGTACATGGCGGCCGGAACCATGGCCGGTGCCGTTGATCTGTCCTTCAGCTCCTCCGCTAATCTCGAAATATTCAAGCTTGATTTCCAGTCGGACGATCGGGAACTGTCCTTGGTCGGGGAGTGCCCGAGCTCCGAGCGGTTCAATCGTCTGTCTTGGGGGAAGAGTAGTTCTGCCTCTGAAGATTTCGCCCTCGGGATTGTTGCTGGTGGGCTGGTCGATGGAAACATTGACCTCTGGAATCCTCTCACTCTGATCCGTTCGAAGGCAAGTGAAAGTGCTCTTGTTGGACATCTTGCAAGGCACAAAGGGCCTGTTCGTGGTCTTGAGTTTAATACCATTTCACCAAATCTTCTTGCATCTGGGGCTGAGGATGGTGAAATTTGTATATGGGATTTGGCCAATCCTTCAGAGCCTTCTCATTTTCCACCTCTCAGGGGTAGTGGCTCTGCTTCCCAGGGGGAAATTTCATTCTTATCCTGGAATAGCAAAGTCCAACACATATTAGCATCAACCTCATATAATGGGACCACTGTGGTCTGGGACCTAAAGAAGCAAAAGCCAGTGATAAGCTTTACAGACTCAGTTAGAAGGCGGTGCTCAGTTTTGCAGTGGAATCCTGATACTGCTACTCAGCTAGTTGTTGCATCAGATGAAGATGGTTCTCCTTCTCTAAGGCTATGGGATATGAGGAATATAATGGCACCAGTTAAAGAGTTTGTGGGACACAGTAGAGGTGTAATTGCAATGTCATGGTGCCCCCATGATAGCTCTTATTTGGTAAGCTGTGGCAAAGATAGTCGAACTATATGCTGGGACACAAAATCTGGAGAGATTGTATGTGAATTGCCTTCTGGGACAAACTGGAACTTTGATGTACACTGGTATCCTAAAATGCCTGGAGTAATTTCAGCATCTTCCTTTGATGGGAAAATTGGCATCTACAATGTTGAGGGTTGCAGTCGATATGGTGTTGGGGAAAATGAGTTTGGTACAGTTTCTCTGAGAGCCCCAAAGTGGTATAAGCGTCCTGTTGGGGTGTCTTTTGGTTTTGGTGGCAAGCTTGTATCATTTCATCCCAAGTCATCTGCTGCAGGTGCTCCAGCTGTAGCTTCAGAGGTTTATGTGCATAATATGGTCACTGAAGATAGTCTAGTGAGTCGTTCCTCTGAATTTGAAGCTGCAATACAAAATGGGGAAAGGCCTTTACTGAGGGTTTTATGTGATAAAAAATCTCAGGAGTCAGAATCTGAGGAGGAAAGGGAAACATGGAGCTTCTTGAAGGTTATGTTTGAAGATGATGGGACAGCACGAACAAAACTACTCACACACCTTGGGTTTAGTGTACCTATTGAAGAAAAGGGCACGGTTGTAGGTGATCTTACCCAAGAAGTCAATGCTCTTGGACTTGAGGAGACAGTTGATAGTAAAGTAGGAGATGGGACTACTAATGACACTACTGTTTTCCCCTCTGATAATGGGGAGGACTTTTTTAACAACCTTCCTAGTCCCAAAGCTGATACACCTGTGTCTACTTCTGGTGATAATTCTGTTGCTGTGGATAATGCCAATGGTTCGGAGAAAATCCAAGAAGAGTTGGAAATGGAGGAGAGCAATGATCCTACATTTGATGATAGTGTTCAGCGGGCTTTAGTTATTGGGGACTACAAAGGGGCAGTTGCACTATGCATATCTGCAAATAAGTGGGCTGACGCATTAGTTATTGCACATGTAGGTAGTGCTTCATTGTGGGAAAGTACATGGGACCAATACCTTAAGAGAAGCAGATCACCATACTTAAAGGTTGTCTCAGCGATGGTGAGCAATGATCTCTTAAGCCTTGTCAATACTAGGCCTCTAAAATTTTGGAAAGAGACACTTGCTCTTCTCTGTAGTTTTGCACAGAGAGATGAATGGGCAATGCTTTGTGATGCACTTGCTTCAAAACTCATGTCAGCTGGAAATACATTAGCTGCAACTCTCTGTTATATATGTGCTGGAAATATTGATAAAACAGTTGAAATTTGGTCAAAGAATCTGCAGACTGAGCATGAAGGAAAATCCTATGTTGACCTTCTTCAGGATTTGATGGAAAAGACTATTGTTCTTGCCTTAGCAACAGGGCAGAAGCAATTTAGTGCATCTCTTTGCAAGCTTGTTGAGAAATATGCTGAAATTTTGGCAAGTCAAGGGCTGTTGACCACAGCAATGGAGTATTTAAAACTATTGGGTTCCGATGAACTGTCTCCTGAGCTTTTGATCTTAAAAGATCGGATTGCCCTCTCTACGGAACCTGAGAAAGATGTCAAGACCACTGCATTCGAAAATACTCAGTCACAGAGTGGATCCTTTTACAGTGCTGATAATTCCAATTATAGTAGAGATTATTATCAGGAGTCTGTATCCACACAAGTGCAGCATGGTGTTTACGATGAAAACTATCAACAGCCTTTTAATCCTTCGTATGGAAGGGGATATGCAGATCCGGCTTCGTATCAGCAACCTCAACAACCTAACTTGTTTGTTCCATCACAGACACCTCAGGTTCCCCAGGTTCCCCAGCCAAACTTCTCTTCTGCTCCTGTCACACAACCTCCTTTGAGACCTTTTGTTCCTCACACTCCTCCAGTGCTAAAAAATGTTGAGCAATATCAGCAGCCAACATTGGGTTCTCAGTTGTATCCTACAGCTACCAATTCACCTTACCAACCCACACCCCCTGCCACATCTCAAGTGGGTTTGGCTCATGGCCAGAAGTTGCCACAGGTTGTGGCACCAACCCCAAATCCAAGGGGATTCACACCTGTCTCCAGTACTGGTGTTGTCCAAAGACCTGGGATGGGATCACAACCTTCCAGTCCCCCCCAGGCAGCACCTGTTCAGCCAGCTCCAGCACCACCTGCTCCACCAGCTACTGTGCAGACAGCTGATACTTCCAATGTTCCTGTCAACCAAAAGCCCATTGTCGCAACATTGACAAGGCTTTTCAATGAGACCTCAGAAACACTGGGAGGTGCACGTGCAAACCCAGCTAAAAAGCGGGAGATAGATGACAATTCAAGGAAACTTGGAGGATTATTTGCAAAATTGAACAGTGGGGACATCTCTAAAAATGCTGCTGATAAGCTCCTTCAGCTCTGTCAGGCATTAGACAAAGGCGATTTTGGTACTGCCCTACAAATTCAGGTACTTCTTACTACAACCGAATGGGATGAATGCCAATCCTGGTTAGGTTCACTGAAACGGATGATCAAGACAAGACAGAGTGTCAGATTAAATTGA 3339 0.4519 MACIKGVNRSASVALSPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFQSDDRELSLVGECPSSERFNRLSWGKSSSASEDFALGIVAGGLVDGNIDLWNPLTLIRSKASESALVGHLARHKGPVRGLEFNTISPNLLASGAEDGEICIWDLANPSEPSHFPPLRGSGSASQGEISFLSWNSKVQHILASTSYNGTTVVWDLKKQKPVISFTDSVRRRCSVLQWNPDTATQLVVASDEDGSPSLRLWDMRNIMAPVKEFVGHSRGVIAMSWCPHDSSYLVSCGKDSRTICWDTKSGEIVCELPSGTNWNFDVHWYPKMPGVISASSFDGKIGIYNVEGCSRYGVGENEFGTVSLRAPKWYKRPVGVSFGFGGKLVSFHPKSSAAGAPAVASEVYVHNMVTEDSLVSRSSEFEAAIQNGERPLLRVLCDKKSQESESEEERETWSFLKVMFEDDGTARTKLLTHLGFSVPIEEKGTVVGDLTQEVNALGLEETVDSKVGDGTTNDTTVFPSDNGEDFFNNLPSPKADTPVSTSGDNSVAVDNANGSEKIQEELEMEESNDPTFDDSVQRALVIGDYKGAVALCISANKWADALVIAHVGSASLWESTWDQYLKRSRSPYLKVVSAMVSNDLLSLVNTRPLKFWKETLALLCSFAQRDEWAMLCDALASKLMSAGNTLAATLCYICAGNIDKTVEIWSKNLQTEHEGKSYVDLLQDLMEKTIVLALATGQKQFSASLCKLVEKYAEILASQGLLTTAMEYLKLLGSDELSPELLILKDRIALSTEPEKDVKTTAFENTQSQSGSFYSADNSNYSRDYYQESVSTQVQHGVYDENYQQPFNPSYGRGYADPASYQQPQQPNLFVPSQTPQVPQVPQPNFSSAPVTQPPLRPFVPHTPPVLKNVEQYQQPTLGSQLYPTATNSPYQPTPPATSQVGLAHGQKLPQVVAPTPNPRGFTPVSSTGVVQRPGMGSQPSSPPQAAPVQPAPAPPAPPATVQTADTSNVPVNQKPIVATLTRLFNETSETLGGARANPAKKREIDDNSRKLGGLFAKLNSGDISKNAADKLLQLCQALDKGDFGTALQIQVLLTTTEWDECQSWLGSLKRMIKTRQSVRLN 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2600 1112 ProSiteProfiles Trp-Asp (WD) repeats profile. 259 301 IPR001680 GO:0005515
Bisa02g2600 1112 MobiDBLite consensus disorder prediction 974 990 - -
Bisa02g2600 1112 SMART WD40_4 295 335 IPR001680 GO:0005515
Bisa02g2600 1112 SMART WD40_4 161 201 IPR001680 GO:0005515
Bisa02g2600 1112 SMART WD40_4 252 292 IPR001680 GO:0005515
Bisa02g2600 1112 SMART WD40_4 111 151 IPR001680 GO:0005515
Bisa02g2600 1112 SMART WD40_4 204 248 IPR001680 GO:0005515
Bisa02g2600 1112 FunFam Protein transport protein SEC31 homolog B 353 782 - -
Bisa02g2600 1112 MobiDBLite consensus disorder prediction 910 1003 - -
Bisa02g2600 1112 Pfam WD domain, G-beta repeat 115 151 IPR001680 GO:0005515
Bisa02g2600 1112 MobiDBLite consensus disorder prediction 832 857 - -
Bisa02g2600 1112 Gene3D - 351 782 - -
Bisa02g2600 1112 MobiDBLite consensus disorder prediction 910 935 - -
Bisa02g2600 1112 FunFam Protein transport protein SEC31 homolog B 996 1110 - -
Bisa02g2600 1112 Gene3D Functional domain of the splicing factor Prp18 996 1111 - -
Bisa02g2600 1112 FunFam Protein transport protein SEC31 homolog B 1 337 - -
Bisa02g2600 1112 Pfam Sec23-binding domain of Sec16 566 761 IPR024298 -
Bisa02g2600 1112 ProSitePatterns Trp-Asp (WD) repeats signature. 138 152 IPR019775 -
Bisa02g2600 1112 ProSiteProfiles Trp-Asp (WD) repeats profile. 118 160 IPR001680 GO:0005515
Bisa02g2600 1112 MobiDBLite consensus disorder prediction 950 973 - -
Bisa02g2600 1112 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 118 152 - -
Bisa02g2600 1112 PANTHER SEC31-RELATED PROTEIN 3 1107 IPR040251 GO:0006888
Bisa02g2600 1112 Gene3D - 1 337 IPR015943 GO:0005515
Bisa02g2600 1112 SUPERFAMILY WD40 repeat-like 12 337 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2600 Bisa-ChrBisa02 65942467 65954230 Dispersed/Wgd