Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2583 ATGACTCCCCGTGTTTCAAAATCCAGACCTTCTCCTCCATCACTGTCTGAATCATCTTCCAGCTCTTGCAGCAACCGCAGTACTATCGGCAGTGAAACCGACGACACTCCCCTTTCATCCAAGCGATTTTCGCTCCAAGACGTGAAATTTCAGTTTCCCTTTACACCCATTTCTAAATCTTCCTCACATCATCTTCTAGCGATTCTCTCTGGGCACATCGGCTCTGTTTCTTGCTTGGCTCTGTGTGGTGAATTCATACTCAGTGCTTCTCAGAGCAAGGACATCATCGCATGGCAACACCCAGATATGAGGATTTTCACCAAGTTCGGACAAGGAGAGGGGTCAGTGAAATCTCTTGTAACTGTCGGAAACAAGGTCTTCACAGCCCACCAAGACGGCAAAATCAGAGTCTGGAAAGTTTCTAGAAGCTCAGAGGATGTGTTCAAGCTTGTTGAGACTCTTCCGACAACTATGGACTATTTGGGGAGATTCATGAAACAGAGCAACTATGTCCAAACAAGGAGGCACCACAGGCGTCTGTGGATTGAGCATTCGGATAGTATTTCCTGCTTAACTGTTTACAATGGGATGATCTACTCTGGGTCGTGGGATAAGACCCTAAAGGTGTGGAAGCTGTCAAATTTGAAGTGTTTGGAATCCATTAGAGCTCATGAAGACGCCATTAATGGGCTGGTAGCTCGTAAAGGAATTGTGTATTCTGCTTCTTCAGATGGAAAGATCAAAGCTTGGGGAAGAAAAGAGGGGAAGATGAAGAAGATCTCACATAGTCTGAAAGCAACTTTGGAGGGTCACAGAGATGTGTCTTTCAATTCTGTGGTTGTTTCTGAAGATGGGAAATGGGTATATGGAGGAGGATCTGATGGTTTTGTGATGGGATGGGAGTCAGAACATAGTTTTAGAACCCAGACTGACCGAATGAGTGATCCGACGAGCCCGTCACCGGACCAAAAGGATTCGCAAAATTGGAAGCTTGTATGTGAAACAAAGGCACATAGAACGGCTGTGTTGTGTATGTGTTTGATGGGGGAGATTCTGTTCAGTGGGTCATCAGACAAGAGCATTGGGATTTGGAAGAGGGAGGGTCATGGAGGGAAGCTTTGCAAAGTTGGGGTGATAAGAGGGCATGAAGGGCCTGTGAAGTGTTTGGAGGCATCAAATAGTAGAAGTGGTGGTGGATTTTTGCTTTATAGTGGAAGCCTTGACAGAAGCTTGAGAGTTTGGTGGGTTCCTAGGTACACTGAGGAGGATAGAGAGGAAGAGTCTAGTGCTACACTTTGA 1299 0.4596 MTPRVSKSRPSPPSLSESSSSSCSNRSTIGSETDDTPLSSKRFSLQDVKFQFPFTPISKSSSHHLLAILSGHIGSVSCLALCGEFILSASQSKDIIAWQHPDMRIFTKFGQGEGSVKSLVTVGNKVFTAHQDGKIRVWKVSRSSEDVFKLVETLPTTMDYLGRFMKQSNYVQTRRHHRRLWIEHSDSISCLTVYNGMIYSGSWDKTLKVWKLSNLKCLESIRAHEDAINGLVARKGIVYSASSDGKIKAWGRKEGKMKKISHSLKATLEGHRDVSFNSVVVSEDGKWVYGGGSDGFVMGWESEHSFRTQTDRMSDPTSPSPDQKDSQNWKLVCETKAHRTAVLCMCLMGEILFSGSSDKSIGIWKREGHGGKLCKVGVIRGHEGPVKCLEASNSRSGGGFLLYSGSLDRSLRVWWVPRYTEEDREEESSATL 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2583 432 MobiDBLite consensus disorder prediction 307 327 - -
Bisa02g2583 432 MobiDBLite consensus disorder prediction 1 38 - -
Bisa02g2583 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 181 220 IPR001680 GO:0005515
Bisa02g2583 432 PANTHER F-BOX AND WD40 DOMAIN PROTEIN 18 418 IPR045182 -
Bisa02g2583 432 MobiDBLite consensus disorder prediction 311 327 - -
Bisa02g2583 432 FunFam BnaA09g28200D protein 171 255 - -
Bisa02g2583 432 Pfam WD domain, G-beta repeat 266 300 IPR001680 GO:0005515
Bisa02g2583 432 Pfam WD domain, G-beta repeat 183 211 IPR001680 GO:0005515
Bisa02g2583 432 Pfam WD domain, G-beta repeat 376 414 IPR001680 GO:0005515
Bisa02g2583 432 SUPERFAMILY WD40 repeat-like 63 418 IPR036322 GO:0005515
Bisa02g2583 432 SMART WD40_4 261 301 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 214 251 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 62 99 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 173 211 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 102 139 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 328 365 IPR001680 GO:0005515
Bisa02g2583 432 SMART WD40_4 372 415 IPR001680 GO:0005515
Bisa02g2583 432 Gene3D - 57 158 IPR015943 GO:0005515
Bisa02g2583 432 Gene3D - 164 431 IPR015943 GO:0005515
Bisa02g2583 432 PRINTS G protein beta WD-40 repeat signature 198 212 IPR020472 -
Bisa02g2583 432 PRINTS G protein beta WD-40 repeat signature 126 140 IPR020472 -
Bisa02g2583 432 PRINTS G protein beta WD-40 repeat signature 402 416 IPR020472 -
Bisa02g2583 432 ProSiteProfiles Trp-Asp (WD) repeats profile. 379 414 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2583 Bisa-ChrBisa02 65601569 65602867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2583 171 367 Miscellaneous Gene Families AT5G08390 20.325 1.68e-06 48.5