Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2580 ATGGTTTTGGATTCCTCGAACAATCATCTTGAGCATGAGGAAGAAAAGGAAAAAAATGAAGATGATTTGGCAGGCGTTTCTGCGATGCTTATGTGCTGTAGCCAGGTGTACTCTGCGGCTCTAAAAGCTGCTGTAGAGCTCAACTTGTTTGAGATCATAGCCAAGGAGAAGGGAAGACACGTGTCGGCCTCTGAAGTGGCTTCTCAGCTGCCAAGCTCCATGCAACACGAGGAGTTGAGTTTCAGAATGGACCGAATGTTGAGGCTTCTTGCGAGCCACTCTGTTCTTTCGTGTTCTTATCGCGCAGTTGAAAATGGCGACACTGAGAGAGTGTATGGGATTTCTGCTGTTGGGAAGTACTTTGTTGGTGATGACGACCACAATGGTGCGAATTTGGGAGCGCTCTCATCATACATATCTCATCCAGCACTAGTCGATGCTTGGCTGAATTTTAAGTATGCAATAATAGAGAAAGACAATGACCTATTCAAGAAAGTGCATGGAATGCCCATGTACCAATACACACAGAAAGATCCAACATGGAACTCCATTTTCAACAAGGCAATGGCTAACCTCTGCAACATAGAGATGAAGAGGATACTTGAAATCTACAAAGGATTTGAGGGAATATCCACACTCGTTGATGTGGGAGGTGGCACTGGCCAAAACCTAAGAGCCATAATCTCAAAGTATCCTTCAATAAAGGGTATCAATTTTGACTTGCCCCAAGTCATTCAAAATGCACCACCCCATCCAGGGATTGAGCATGTTGGAGGAGATATGTTTGCAAGCGTTCCAAAAGGCGATGCCATCATATTAAAGTCTGTGTGTCATAATTGGTCAGATGAGGATAGCATAAAAATTTTGAGAAAGTGCCACGAAGCATTGCCAGAGAAAGGGAAGGTGATGGTATTGGAGTTGATAATGCCAGAAGCAATGGAATTCTCAGAAGAAGCCAAGTTGGCTTGCACTGTCGACAATCTCATGTTCCTTCATGACGGCACAGAAAGAACTCAGAATCAGTTTGAGTCTCTCTGCAAACGCGCTGGTTTTTCTTCTTTCAAATTTGCTTGCCGTGCCTTCTCTGTCCTCGCACTCATGGAATTTTACAAATAA 1116 0.44 MVLDSSNNHLEHEEEKEKNEDDLAGVSAMLMCCSQVYSAALKAAVELNLFEIIAKEKGRHVSASEVASQLPSSMQHEELSFRMDRMLRLLASHSVLSCSYRAVENGDTERVYGISAVGKYFVGDDDHNGANLGALSSYISHPALVDAWLNFKYAIIEKDNDLFKKVHGMPMYQYTQKDPTWNSIFNKAMANLCNIEMKRILEIYKGFEGISTLVDVGGGTGQNLRAIISKYPSIKGINFDLPQVIQNAPPHPGIEHVGGDMFASVPKGDAIILKSVCHNWSDEDSIKILRKCHEALPEKGKVMVLELIMPEAMEFSEEAKLACTVDNLMFLHDGTERTQNQFESLCKRAGFSSFKFACRAFSVLALMEFYK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2580 371 Gene3D - 164 200 IPR036388 -
Bisa02g2580 371 SUPERFAMILY "Winged helix" DNA-binding domain 25 126 IPR036390 -
Bisa02g2580 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 135 368 IPR029063 -
Bisa02g2580 371 Pfam O-methyltransferase domain 148 352 IPR001077 GO:0008171
Bisa02g2580 371 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g2580 371 PIRSF O-mtase 4 371 IPR016461 GO:0008168
Bisa02g2580 371 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Bisa02g2580 371 Gene3D Vaccinia Virus protein VP39 182 360 IPR029063 -
Bisa02g2580 371 Gene3D - 35 160 IPR036388 -
Bisa02g2580 371 CDD AdoMet_MTases 212 304 - -
Bisa02g2580 371 FunFam Caffeic acid 3-O-methyltransferase 6 121 - -
Bisa02g2580 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 29 371 IPR016461 GO:0008168
Bisa02g2580 371 FunFam Caffeic acid O-methyltransferase 126 371 - -
Bisa02g2580 371 PANTHER O-METHYLTRANSFERASE 29 360 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2580 Bisa-ChrBisa02 65518713 65523194 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2580 21 371 Monolignol Biosynthesis Gene Families AT5G54160 47.875 5.53e-113 332