Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g2549 | ATGGTTTTTGTTCAAACACCCAGCCAATTTATCCACAGCTTGTGCGCGATCGTTGTCAAGGGTCATTGGAGCACTCTGTTGAAAGTGAGGAACGGTTCAGCTATCACTTCCACTACCATTCACAAGGTACTTCTGCAGCTCTCACTCCGTGGCTATGGCCCATCTCATTCCTTATCATTCTTCAAATGGATCGAGTCAATTCCAAATTACAGGCACTCTTTGCAATGTTCATGGTCCATGCTTCATATCCTCGTTAAGCATAAGCATTTTAAAATTGCACAAGAGATCCTTGAAAAAATTGCTTACAAGGATTTCCTATCATCACCGTCGGTTTTGAGAACTTTGGTGGAAGCTCAAGATGACCCAGAAGTAAACTCGCATATATTGAGCTGGCTTCTAATAATTTATTCAAAGTCAAAGATGACCAGCGATGCAATTCAGGTTTTTGAGCAGATGAGGTTACATAAATTGAACCCTCACTTGCATGCTTGTACTGTACTTTTGAATTCTTTGGTCAAGGAAGGGGTTACTAATATGGTATGGAAGATTTACAAAAAAATGGTTCAGGTTGGGGTTTTTCCTAATATACATATTTATAATGTGTTAATCCATGCTTGTTCCAAATCAGGAGATGTGGAGAGGGCAGAACAGTTACTAAATGAGATGGAAGTGAAGGGTGTGTTTCCTGATATTTTCACTTACAATACTTTGATATCATTATATTGCAAGCATAGTATGCACTATGATGCTTTATCCATCCAGCACAGAATGGAAAGAGAAGGAATAAACCTTGATATTGTCAGTTACAATTCTCTTATTTATGGATTTTGTAGGGAGGGTAGGATGAGAGAAGCCATGAGGATATTTAGCGAAATAAATGGTGCAATTCCCAATCATGTTACCTATACTACATTGATTGACGGGTATTGTAAAACAAATGACCTTCAGCAAGCTCTAAAATTGCGTGACATGATGGAGGCTAAAGGATTCTACCCTGGAGTTGTTACTTACAACTCAATTTTGCGCAAGCTGTGTCAGGATGGCAGAATAAGAGATGCAAATAAACTTTTGACTGAGATGAGTGAAAGAAAAGTGCAAGCTGACAACGTCACATGTAACACCTTGATCAATGCTTACTGCAAAATAGGAGATATGAAATCTGCATTGAAATTTAAGGACAAGATGTTAGAGGCTGGATTGAAGCCTGACCCATTTACGTATAAAGCACTGATTCATGGGTTCTGCAAGATAAAGGAACTAGAAAGTGCCAAGGAGATATTGTTCGGCATGGTTGATGCTGGGTTGTCCCCCAATTACTACACTTATTCTTGGATTGTAGATGGTTACTGCAATAAAGACAATGAAGAGGCAGTTGTTACACTCCTATCTGAGTTTCTTAGTAGAGGTCTTTGTATTGATGTTTCATTATACAGGGCATTAATAAGAAGGTTATGTAAGCTAGAAAGGATAGCATGTGCTGAAAAGTTATTCAATCTTATGGAAAGAAAGGGTATATCAGGTGATAGTGTCATCTACACCAGTCTCGCTTATGCTTACTGGAAATCAGGCAATGCAAGGGTTGCCTCTAATATGTTAGAAGAGATGGCCAGGAGGAGGTTGATGATAACAAGCAAAATCTATAGATGTTTTGGTGAACGTAGTCAAAACCACACATCAAGTTTATTTTGGAATCATGTATTGGAAAGTGGCCTGATGTCAAGAAATACAATGAATAAAATACAGCAGATGGAATTATGA | 1758 | 0.3845 | MVFVQTPSQFIHSLCAIVVKGHWSTLLKVRNGSAITSTTIHKVLLQLSLRGYGPSHSLSFFKWIESIPNYRHSLQCSWSMLHILVKHKHFKIAQEILEKIAYKDFLSSPSVLRTLVEAQDDPEVNSHILSWLLIIYSKSKMTSDAIQVFEQMRLHKLNPHLHACTVLLNSLVKEGVTNMVWKIYKKMVQVGVFPNIHIYNVLIHACSKSGDVERAEQLLNEMEVKGVFPDIFTYNTLISLYCKHSMHYDALSIQHRMEREGINLDIVSYNSLIYGFCREGRMREAMRIFSEINGAIPNHVTYTTLIDGYCKTNDLQQALKLRDMMEAKGFYPGVVTYNSILRKLCQDGRIRDANKLLTEMSERKVQADNVTCNTLINAYCKIGDMKSALKFKDKMLEAGLKPDPFTYKALIHGFCKIKELESAKEILFGMVDAGLSPNYYTYSWIVDGYCNKDNEEAVVTLLSEFLSRGLCIDVSLYRALIRRLCKLERIACAEKLFNLMERKGISGDSVIYTSLAYAYWKSGNARVASNMLEEMARRRLMITSKIYRCFGERSQNHTSSLFWNHVLESGLMSRNTMNKIQQMEL | 585 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g2549 | 585 | Pfam | PPR repeat family | 297 | 346 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | PPR repeat family | 194 | 243 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | PPR repeat family | 368 | 416 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 473 | 507 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 368 | 402 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 298 | 332 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 230 | 264 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | Pentatricopeptide repeat domain | 496 | 539 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | PPR repeat | 164 | 192 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | PPR repeat | 133 | 154 | IPR002885 | - | |
| Bisa02g2549 | 585 | Pfam | PPR repeat | 261 | 291 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 267 | 291 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 370 | 403 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 300 | 333 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 163 | 195 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 405 | 438 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 232 | 265 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 198 | 231 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 335 | 368 | IPR002885 | - | |
| Bisa02g2549 | 585 | NCBIfam | pentatricopeptide repeat | 476 | 508 | IPR002885 | - | |
| Bisa02g2549 | 585 | Gene3D | Tetratricopeptide repeat domain | 328 | 466 | IPR011990 | GO:0005515 | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 265 | 295 | IPR002885 | - | |
| Bisa02g2549 | 585 | PANTHER | ATPASE EXPRESSION PROTEIN 3 | 42 | 454 | - | - | |
| Bisa02g2549 | 585 | Gene3D | Tetratricopeptide repeat domain | 24 | 189 | IPR011990 | GO:0005515 | |
| Bisa02g2549 | 585 | Gene3D | Tetratricopeptide repeat domain | 255 | 327 | IPR011990 | GO:0005515 | |
| Bisa02g2549 | 585 | Gene3D | Tetratricopeptide repeat domain | 467 | 541 | IPR011990 | GO:0005515 | |
| Bisa02g2549 | 585 | Gene3D | Tetratricopeptide repeat domain | 190 | 254 | IPR011990 | GO:0005515 | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 160 | 194 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 333 | 367 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 508 | 542 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 403 | 437 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 125 | 159 | IPR002885 | - | |
| Bisa02g2549 | 585 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 195 | 229 | IPR002885 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g2549 | 147 | 552 | Glycosyltransferase | AT1G05670 | 32.353 | 6.69e-68 | 232 |