Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2548 ATGGGTATGGCTGCAGAGACTCAGTTCCATGTTCTGGCCGTTGATGATAGTCTTATTGACAGAATGTTGATTGAGAGGCTCCTCAAAACATCATCATTTCATGTTACTGCAGTGGACTCTGGTAGCAAAGCTTTGGAATTTCTTGGATTGAATGAAGATGAGCAGAGGAATGCAGATACTCTCTGTGTTGCTTCAGATAGCCATCAGGATTTAGAAGTAAACTTGATCATAACAGATTACTGTATGCCAGGAATTACAGGCTATGATCTTCTGAGAAAAATCAAGGAATCTAAATCCCTAAAAAACATACCAGTAGTGATTATGTCCTCAGAGAATGTCCCATCAAGGATCAACAGATGCTTAGAAGAAGGAGCAGAAGAATTTTTTCTGAAACCAGTTCAGCTGTCAGACGTAAACAAGCTCAAGCCACATTTGATGAAATCAAGAGTTAAGGAAGAGGAAGATCAATTCATCAATAACAAAAGGAAGGGCATGGAAGAAACCCAATCACCAGATAAAACCAGAGCAAAGATATAG 537 0.3929 MGMAAETQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALEFLGLNEDEQRNADTLCVASDSHQDLEVNLIITDYCMPGITGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQLSDVNKLKPHLMKSRVKEEEDQFINNKRKGMEETQSPDKTRAKI 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2548 178 CDD REC_typeA_ARR 11 141 - -
Bisa02g2548 178 Gene3D - 10 176 - -
Bisa02g2548 178 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 162 IPR045279 GO:0009736
Bisa02g2548 178 SUPERFAMILY CheY-like 8 147 IPR011006 -
Bisa02g2548 178 MobiDBLite consensus disorder prediction 152 178 - -
Bisa02g2548 178 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
Bisa02g2548 178 SMART REC_2 9 145 IPR001789 GO:0000160
Bisa02g2548 178 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2548 Bisa-ChrBisa02 64557406 64558841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2548 1 154 Response Regulator Gene Family AT3G57040 70.323 1.52e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa02g2548 Response_reg 3.8e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2548 02 64557406 64558841 Bisa12g1403 12 24155089 24159407 CCT