Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2528 ATGAAAGTCCCGTGCTGTTCGGTTTGCCAGACGCGGTACAACGAGGAAGAGCGAGTCCCACTTCTGCTCCAATGTGGGCATGGATTTTGCAGAGAGTGTCTTTCGAGGATGTTCTCGGCGTCCCCAGATACGACGTTGGTGTGTCCGAGATGTCGCCATGTGTCCATCGTCGGGAACTCTGTGCAAGCTTTGCGCAAGAACTACGCCGTGCTCGCTCTTATTCATTCGGCTTCGAACTCTGCGAGCTCGAATTTCGACTGTGACTTCACGGACGACGATGAAGAAGGGGGTGATGGCGGTGCAGAAGATGGGGACAATGACGACGACTCGGTCCTACGCCGCCGGTGTAGCCGCGGGTCCCAAACATCAAGCTCCGGCGGCTGTGGACCGGTTATCGAGGTTGGGGTGCACCAAGAGTTGAAATTGCTGCGGCGGATAGGAGAGGGGAGGAGGGCTGGTATGGAAATGTGGACGGCGGTGATTGGTGGTGGCGGTGGAAATGGACGGTGCCGGCATAACGTGGCGGTGAAGAAGGTAACGATAGTGGAGGAGATGGACTTGGATTGGGTACTGGGGCAGCTTGAGAATTTGCGTCGTGCTTCAATGTGGTGTAGAAATGTATGTACTTTTCATGGGGCATTGAGGATGGATGAGAGTTTGTGTCTTGTGATAGACCGTTGTTATGGATCAGTTCAGTCTGAGATGCAGTGCAACGAGGGAAGACTTACTTTGGAGCAAGTCTTAAGGTATGGGGCAGACATTGCAAGAGGGGTGGCTGAGCTTCATGCTGCAGGCATTGTTTGCATGAATCTAAAACCATCCAATCTTCTTCTTGATGCAAATGGTCGTGCAGTGGTTTCAGATTATGGACTTGCTGCAATTTTGAAGAAGCCTTCCTGTCGGAAGGCCCGACCAGAGTGTGACTCCACAAAGATCCATTCATGTATGGAGTGTATAATGCTCAGTCCACATTACACAGCTCCGGAGGCTTGGGAACCTGTGAAGAAGTCATTAAATTTGTTCTGGGATGATGCAATAGGTATATCTGCAGAGTCGGATGCCTGGAGTTTTGGTTGTACATTGGTGGAAATGTGCACGGGTTCTGTTCCTTGGGCTGGTTTAAGTGCAGAGGAAATTTATCGAGCAGTTGTCAAGGGAAAGAAACTGCCACCACAATATGCTAGTGTGGTTGGTGGTGGAATACCTAGGGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCCAAAAGGCCTAGCTTCAATGCAATGTTAGCAATATTTCTTCGTCATTTGCAGGAAATACCGCGCAGTCCTCCTGCAAGCCCTGATAATGACTTTGTTCAATCCTCTGTGTCCAATGTGGTAGAGCCTTCCCCTCCACCTGAATTGGAAGCTCCTCAAAAGAACCCAAATCATCTACATCGACTTGTGTCTGAAGGGGATGTCAGGGGAGTTAGAGGTCTTATTGCGAAGGCTGCTTCAGAAAATGGTAGCAACTACATATCTTCTCTATTGGAAGCTCAAAATGCTGATGGACAAACTGCTCTTCATTTGGCTTGTAGAAGGGGTAGTTCAGAACTTGTTGAAGCTATTTTGGAGTACAAAGAGGCAAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCATTAGCAGCTGGATCACCAGAATGTGTCCGTATTCTTATCAAAAGTAATGCTAATGTGAGGTCCCGGTTGAGAGATGGCTTAGGCCCATCTGTTGCTCACGTTTGTGCCTATCATGGCCAACCAGATTGCATGCGAGAGTTACTATTGGCTGGAGCTGATCCCAATGCAGTGGATGATGAAGGTGAAACTGTACTACATAGAGCAGTTGCCAAGAAGTATACAGACTGTGCTCTTGTGATATTGGAGAATGGAGGCAGCAGATCAATGACCATCTTAAATTCGAAGAATTTGACACCACTGCATTTGTGTGTGGCAACATGGAATGTGGCTGTTGTGAAAAGATGGGTGGAAGTTGCAACTTCTGATGAGATTGCTGAAGCAATTGACATACCAAACCCTATTGGCACTGCGTTGTGCATGGCAGCTGCTTCTAAGAAGGACCACGAAATTGAGGGCAGAGAATTGGTGCGGATATTGCTTGCTGCGGGAGCAGATCCATCTGCTCAAGATGTGCAGAATGGGCGGACAGCTTTGCATACAGCTGCGATGACTAATGATGTTGAGTTGGTCAAGGTTATTCTTGCTGCTGGTGTTGATGTGAACATTCGCAATGTGCACAACAGTATACCTCTTCACTTGGCTCTAGCTAGGGGAGCAAAGTCATGTGTTGGATTGCTTCTATCTGCTGGGGCAGATTATAATTTACAGGATGATGATGGTGACAATTCCTTCCATATAGCAGCAGAGACAGCAAGAATGATTCGTGAAAATCTTGATTGGCTCATTGTTATGTTAAGAAATCCTGATGCTGATGTTGAAGTGAGAAACCACAGTGGCAAGACACTACGTGACATCTTAGAGGCCCTTCCCAGAGAGTGGATATCTGAAGATCTGATGGAGGCACTTGTCAATAGAGGAGTTCATCTATCTCCTGCAATATTTGAAGTGGGAGACTGGGTGAAGTTTAAAAGAACAGTCACAACTCCAACATATGGATGGCAAGGTGCTAGACAAAAGAGTGTTGGCTTTGTGCAAAGTGTTTCAGACAGAGAGAATCTCATTGTTTCGTTTTGTTCTGGAGAGGCTCGTGTTATGGCAAATGAAGTTGTAAAAGTCATTCCATTAGACAGGGGACAACATGTACAGCTAAAAGCAGATGTAAAAGAGCCCAGGTTTGGTTGGCGTGGACAGTCACGTGACAGCATTGGGACGGTTTTATGTGTTGATGATGATGGAATACTTCGTGTTGGGTTTCCTGGAGCATCCAGAGGATGGAAAGCTGACCCATCCGAGATGGAAAGGGTTGAAGAATTCAAGGTTGGAGACTGGGTTCGTATTCGACCCACTCTTACATCTGCAAAGCATGGATTAGGATCTGTGACACCAGGAAGCATTGGCATAGTATATTGTATTAGACCAGACAGTAGTCTCTTAATTGAACTGAGCTATTTGCCAACTCCATGGCATTGTGAACCAGAAGAGATTGAGCATGTTCCTCCATTTAGGATTGGTGATCGGGTATGTGTGAAGCGATCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTGTTGGAAGAATAAGTGAGATTGAGAATGATGGTCTATTAATAATTGATATACCAAATCGACCCATACCATGGCAGGCTGATCCATCTGACATGGAGAAGGTGGAAGATTTTAAGGTTGGAGATTGGGTCAGAGTGAAAGCTTCAGTGTCTTCTCCAAAATATGGGTGGGAAGATATAACAAGGAACAGTATTGGGATAATTCATAGCTTGGAGGAGGATGGCGATATGGGTATTGCTTTTTGCTTCAGGAGTAAGCCTTTTTGTTGCTCTGTCACTGATGTGGAGAAGGTTCCCCCTTTTGAGGTGGGACAAGAAATTCATGTGATGCCATCTGTTACTCAGCCACGGCTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAATAGTGAGAATTGACATGGATGGTGCTTTAAATGTAAGAGTCACTGGTAGGCAGAGCTTGTGGAAGGTTTCTCCTGGAGATGCAGAACGCCTTCCAGGATTTGAAGTTGGTGATTGGGTACGCTCAAAACCAAGCCTGGGAACCAGACCAAGTTATGACTGGAATAGTGTCGGGAAAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGACTCTGGGTACTTGGAGTTGGCTTGCTGTTTTCGTAAGGGGAAGTGGATCACTCATTATACAGATGTTGAAAAGGTTCCTTCCTTTAAAGTTGGGCAGTATGTTAGGTTCCGAACTGGTTTGGTTGAACCACGGTGGGGCTGGAGAGGAGCTCAGCCTGAATCTCGAGGTGTAATAACCAGTATCCATGCCGATGGAGAAGTGAGGGTGGCATTCTTTGGTTTGCCAGGTTTGTGGAAAGGAGATCCTGTGGACCTTGAGATTGAGCAGATTTTTGAAGTAGGAGAGTGGGTGAGGTTGAAAGATAATGCTGATAATTGGAAATCTGTTGGGCCGGGAAGTGTTGGTGTTGTACAAGGAATAGGGTATGACAGTGATGTATGGGATGGAAGCACGCATGTAGGCTTTTGCGGTGAACAAGAAAGGTGGGTTGGACCAACTTCCCATCTTGAAAGAGTGGAGAAACTTCTTGTTGGACAGAAGGTTAGAGTTAAACAAACTGCAAAGCAGCCGAGATTTGGGTGGTCAGGACACACCCATTCTAGTATCGGAACCATATCAACAATTGATGCTGATGGAAAGCTTCGAATATATACTCCTGCAGGATCAAAAGCGTGGATGTTGGACCCATCAGAGGTGGATTTGGTAGAAGAGGAGGAGCTCTGTATTGGAGACTGGGTCAAGGTTAAAGCATCAGTTTCAACCCCAACCCATCAGTGGGGAGAAGTGAACCATTCAAGCATGGGGGTGGTGCATCGGATGGAAGATGAGGATCTATGGGTGGCATTCTGTTTCATGGAGAGGCTATGGCTTTGTAAGGCATGGGAAATGGAAAGGATTAGGCCATTTAAAGTTGGGGACAAGGTAAGGATCCGAGATGAACTTGTGTCCCCACGGTGGGGATGGGGAATGGAGACACACGCTAGCAAGGGACAGGTGACTGGAGTAGATGCAAATGGCAAGCTAAGAATAAAGTTCCGATGGAGGGAAGGGAGGCCCTGGATAGGAGACCCTGCCGATATAGTTCTTGATGAGGATTGA 4884 0.467 MKVPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFSASPDTTLVCPRCRHVSIVGNSVQALRKNYAVLALIHSASNSASSNFDCDFTDDDEEGGDGGAEDGDNDDDSVLRRRCSRGSQTSSSGGCGPVIEVGVHQELKLLRRIGEGRRAGMEMWTAVIGGGGGNGRCRHNVAVKKVTIVEEMDLDWVLGQLENLRRASMWCRNVCTFHGALRMDESLCLVIDRCYGSVQSEMQCNEGRLTLEQVLRYGADIARGVAELHAAGIVCMNLKPSNLLLDANGRAVVSDYGLAAILKKPSCRKARPECDSTKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISAESDAWSFGCTLVEMCTGSVPWAGLSAEEIYRAVVKGKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPSFNAMLAIFLRHLQEIPRSPPASPDNDFVQSSVSNVVEPSPPPELEAPQKNPNHLHRLVSEGDVRGVRGLIAKAASENGSNYISSLLEAQNADGQTALHLACRRGSSELVEAILEYKEANVDVLDKDGDPPLVFALAAGSPECVRILIKSNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGETVLHRAVAKKYTDCALVILENGGSRSMTILNSKNLTPLHLCVATWNVAVVKRWVEVATSDEIAEAIDIPNPIGTALCMAAASKKDHEIEGRELVRILLAAGADPSAQDVQNGRTALHTAAMTNDVELVKVILAAGVDVNIRNVHNSIPLHLALARGAKSCVGLLLSAGADYNLQDDDGDNSFHIAAETARMIRENLDWLIVMLRNPDADVEVRNHSGKTLRDILEALPREWISEDLMEALVNRGVHLSPAIFEVGDWVKFKRTVTTPTYGWQGARQKSVGFVQSVSDRENLIVSFCSGEARVMANEVVKVIPLDRGQHVQLKADVKEPRFGWRGQSRDSIGTVLCVDDDGILRVGFPGASRGWKADPSEMERVEEFKVGDWVRIRPTLTSAKHGLGSVTPGSIGIVYCIRPDSSLLIELSYLPTPWHCEPEEIEHVPPFRIGDRVCVKRSVAEPRYAWGGETHHSVGRISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDFKVGDWVRVKASVSSPKYGWEDITRNSIGIIHSLEEDGDMGIAFCFRSKPFCCSVTDVEKVPPFEVGQEIHVMPSVTQPRLGWSNESPATVGKIVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRPSYDWNSVGKESLAVVHSVQDSGYLELACCFRKGKWITHYTDVEKVPSFKVGQYVRFRTGLVEPRWGWRGAQPESRGVITSIHADGEVRVAFFGLPGLWKGDPVDLEIEQIFEVGEWVRLKDNADNWKSVGPGSVGVVQGIGYDSDVWDGSTHVGFCGEQERWVGPTSHLERVEKLLVGQKVRVKQTAKQPRFGWSGHTHSSIGTISTIDADGKLRIYTPAGSKAWMLDPSEVDLVEEEELCIGDWVKVKASVSTPTHQWGEVNHSSMGVVHRMEDEDLWVAFCFMERLWLCKAWEMERIRPFKVGDKVRIRDELVSPRWGWGMETHASKGQVTGVDANGKLRIKFRWREGRPWIGDPADIVLDED 1627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat profile. 583 615 IPR002110 GO:0005515
Bisa02g2528 1627 Gene3D - 646 767 IPR036770 -
Bisa02g2528 1627 FunFam E3 ubiquitin-protein ligase KEG 228 444 - -
Bisa02g2528 1627 MobiDBLite consensus disorder prediction 92 130 - -
Bisa02g2528 1627 Gene3D Transferase(Phosphotransferase) domain 1 227 456 - -
Bisa02g2528 1627 FunFam E3 ubiquitin-protein ligase KEG 728 861 - -
Bisa02g2528 1627 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 1 1626 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Bisa02g2528 1627 Pfam Ankyrin repeats (many copies) 586 633 IPR002110 GO:0005515
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 1120 1238 IPR040847 -
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 870 988 IPR040847 -
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 1503 1621 IPR040847 -
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 1246 1367 IPR040847 -
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 1373 1494 IPR040847 -
Bisa02g2528 1627 Pfam Mind bomb SH3 repeat domain 994 1114 IPR040847 -
Bisa02g2528 1627 Pfam RING-type zinc-finger 6 49 IPR027370 -
Bisa02g2528 1627 SMART ring_2 6 51 IPR001841 -
Bisa02g2528 1627 SUPERFAMILY RING/U-box 5 57 - -
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat region circular profile. 514 536 - -
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat profile. 514 547 IPR002110 GO:0005515
Bisa02g2528 1627 Gene3D - 457 645 IPR036770 -
Bisa02g2528 1627 SUPERFAMILY Protein kinase-like (PK-like) 169 432 IPR011009 -
Bisa02g2528 1627 FunFam E3 ubiquitin-protein ligase KEG 454 684 - -
Bisa02g2528 1627 CDD RING-HC_KEG-like 3 59 - -
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat profile. 762 794 IPR002110 GO:0005515
Bisa02g2528 1627 Gene3D - 768 854 IPR036770 -
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat region circular profile. 729 760 - -
Bisa02g2528 1627 SMART ANK_2a 729 758 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 548 577 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 762 791 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 689 724 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 651 682 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 583 612 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 616 647 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 795 830 IPR002110 GO:0005515
Bisa02g2528 1627 SMART ANK_2a 514 544 IPR002110 GO:0005515
Bisa02g2528 1627 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 86 IPR013083 -
Bisa02g2528 1627 Pfam Ankyrin repeats (3 copies) 708 793 IPR002110 GO:0005515
Bisa02g2528 1627 Pfam Ankyrin repeats (3 copies) 495 576 IPR002110 GO:0005515
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat profile. 548 580 IPR002110 GO:0005515
Bisa02g2528 1627 MobiDBLite consensus disorder prediction 441 472 - -
Bisa02g2528 1627 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Bisa02g2528 1627 SUPERFAMILY Ankyrin repeat 508 837 IPR036770 -
Bisa02g2528 1627 MobiDBLite consensus disorder prediction 445 459 - -
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat region circular profile. 762 794 - -
Bisa02g2528 1627 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Bisa02g2528 1627 Pfam Protein kinase domain 172 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2528 1627 ProSiteProfiles Ankyrin repeat profile. 729 761 IPR002110 GO:0005515
Bisa02g2528 1627 ProSiteProfiles Protein kinase domain profile. 140 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2528 1627 PRINTS Ankyrin repeat signature 711 725 IPR002110 GO:0005515
Bisa02g2528 1627 PRINTS Ankyrin repeat signature 515 530 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2528 Bisa-ChrBisa02 63727205 63746216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2528 145 462 MAP Kinase Kinase Kinase AT1G53570 25.146 2.53e-16 82.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Bisa02g2528 Pkinase 1.4e-27 CL0016