Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2523 ATGCGATTGCGAGTCGGTGGAGGGGAAAAGCATGGTTCACTATGTGATGGTGGTGTTGGAATACGGGACCACCTTGGACAAGATAGCTCAGGAGTACAGAAAAAGATGAGCTGTCAGCAGCAGCTCCTCCGTCCTTTTCTTCGCTCTCTTGCAAGTTTTCACTTCCTGTCTCCCTGGCGATCTCCTTTCGCTTTCGGCCTCGCGATCTTAAATCTTATCGCCCTTTTACTCTGCCACGCCCTATCAACCCTGAAGAAAATACCCATCTCCAAGAAACCCCAAAAAGCTTTGCTGCTTGCAGAACAATCGAGCTTCTTCGGTTCTCTCATGGAGGTTAAACGCCGAACAGTTTGCGCCCTCGTCGGGAAACTCAGCTCCGTTTCGGAGAAAACTCGCCTCGATGCTCTGTGCGAGCTTCGACTCATGACCAAGCAAGACCCAGAAATCCGTCCTCTGGTTCAAGAATCGGACGCTATTCCTTACTTAGCCGAGACCCTCTATTCCTCTTCCCACGATTCACAAGAAAATGCCGCGGCTACTCTCCTCAATCTCTCAATCTCCTGTAAAGAGGCCCTCGTGTCCATGCGCGGCGTCCTCGACGCGATCTCTCACGTTCTCTCCCACCACCGGTCCACGTCTTCTCCCGCTGCCGTCCAATCCTCGGCCGCCACGTTGCACAGCCTTCTCGTGGTCGACGAATACAGACCCATCATCGGATCCAAGCGCGATATCGTGTACGCGCTTGTGGACATAATCAAGAGCTTGAACTCGCCGTCTCGATCTCTCAAGGATGCTATCAAGGCCTTGTTCGGAATTTCACTATACCCGATGAATCGGAGCACGATGACCCATCTCGGCGCGGTTCCGCCGCTGTTTTCCTTGGTCGTGAAGGACGGAAGAGTGGGGATCGTGGAGGATGCCACGGCGGTGATAGCGCAGGTCGCGGGGTGCGAAGAGAGCGTAGAGGCGTTTCGGAAGGTGTCGGGGATCGGGGTGTTGATTGATCTTCTGGATTTGGCGACTGGGTCGAGCATGAGGACGAAGGAGAATGCGGTTTCTGGATTGCTGAATCTGGTGAGGTGTGGAGGGGACAGGGTGGCTTTGGATGTGAGACAGCGAGCTAACGCCGCAATAGATGGGATCGCCGACGTCGTAGAAAATGGCTGCCCCAAAGGGAAGGGGAAGGCGGTGGCGCTGTTGAAGGTGGTTCTTGATGGCAGTGACATCAATGACACTGAATTGAGGGATCCACGGTTTGAATCCTTACTGAAACAAGCTTCATGA 1284 0.5389 MRLRVGGGEKHGSLCDGGVGIRDHLGQDSSGVQKKMSCQQQLLRPFLRSLASFHFLSPWRSPFAFGLAILNLIALLLCHALSTLKKIPISKKPQKALLLAEQSSFFGSLMEVKRRTVCALVGKLSSVSEKTRLDALCELRLMTKQDPEIRPLVQESDAIPYLAETLYSSSHDSQENAAATLLNLSISCKEALVSMRGVLDAISHVLSHHRSTSSPAAVQSSAATLHSLLVVDEYRPIIGSKRDIVYALVDIIKSLNSPSRSLKDAIKALFGISLYPMNRSTMTHLGAVPPLFSLVVKDGRVGIVEDATAVIAQVAGCEESVEAFRKVSGIGVLIDLLDLATGSSMRTKENAVSGLLNLVRCGGDRVALDVRQRANAAIDGIADVVENGCPKGKGKAVALLKVVLDGSDINDTELRDPRFESLLKQAS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2523 427 Pfam Armadillo/beta-catenin-like repeat 146 185 IPR000225 GO:0005515
Bisa02g2523 427 PANTHER U BOX DOMAIN-CONTAINING 71 402 - -
Bisa02g2523 427 FunFam ARM repeat superfamily protein 111 408 - -
Bisa02g2523 427 SUPERFAMILY ARM repeat 114 403 IPR016024 -
Bisa02g2523 427 Gene3D - 78 415 IPR011989 -
Bisa02g2523 427 SMART arm_5 146 186 IPR000225 GO:0005515
Bisa02g2523 427 SMART arm_5 275 316 IPR000225 GO:0005515
Bisa02g2523 427 SMART arm_5 317 360 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2523 Bisa-ChrBisa02 63615478 63618792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2523 109 400 U-box Gene Family AT2G23140 35.374 3.28e-30 121