Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2487 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTAGGATAAAGAAGATAATGCAAGCAGATGAAGATATTGGGAAAATAGCACAAGCAGTCCCTGTTTTAGTTTCAAAAGCTCTAGAGCTATTTTTGCAAGATCTTTGTGACCATACTTATGATATAACTCTTCAGAGAGGAGCAAAGACCATGAGTGCATTGCATTTAAAGCATTGTGTTCAGAGCTATAATGTCTTTGATTTCCTGAGGGATATCGTCAGCAGGGTTCCTGACTATGGGCATGGCCACTCTGAGTCTGGTGCTGATGACCGAGCCATTTCAAAAAGAAGGAAAGCCGCAGGTGATAATTGCAATGACAGTGATGAGGAGTCTAAGAGGAGCAAGATGCATGAGTTGAACCACAGTGGTGGTACTGGTAGGGGAAGGGGCCGAGGCAGAGGAAGAGGCCGTGGTCGAGGGGCTCGAACTGTAGAAAGAGAGACCCATCATCAGGAGGTTGAACCGGAGCCTTGCACTTTTGCTCAGCCCAGCAGCAAAGATGATCAGAACACAAGCGTGGTGGCAGATAATGGTTCAGAGTCAAAGGAGTTACCGAAGGAGAATGCTGCAATTCCTGGTGAAGGCACTCAGACTTGCAATCGCATTGATCTGAATGCCGGCACGGATGAAAACGTTGACATGAATGCTAGCACAGTAGCTTGTACCTCGTTGCCTGAACCTGCAACTGAGACCAAGCATGAAGAAATCCCAGGCTGGTCTATTTCTGAAGTGGACAAGATGGCCATCGACTCTATGCAGCTTGCACAGCTTGGTAGTCAGTTAGAAGAGGAGGAGGATTACGACGAGGAAGGGTAA 849 0.4747 MRKKLDTRFPAARIKKIMQADEDIGKIAQAVPVLVSKALELFLQDLCDHTYDITLQRGAKTMSALHLKHCVQSYNVFDFLRDIVSRVPDYGHGHSESGADDRAISKRRKAAGDNCNDSDEESKRSKMHELNHSGGTGRGRGRGRGRGRGRGARTVERETHHQEVEPEPCTFAQPSSKDDQNTSVVADNGSESKELPKENAAIPGEGTQTCNRIDLNAGTDENVDMNASTVACTSLPEPATETKHEEIPGWSISEVDKMAIDSMQLAQLGSQLEEEEDYDEEG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2487 282 MobiDBLite consensus disorder prediction 90 135 - -
Bisa02g2487 282 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Bisa02g2487 282 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Bisa02g2487 282 MobiDBLite consensus disorder prediction 90 209 - -
Bisa02g2487 282 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982
Bisa02g2487 282 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 117 - -
Bisa02g2487 282 MobiDBLite consensus disorder prediction 173 189 - -
Bisa02g2487 282 MobiDBLite consensus disorder prediction 149 165 - -
Bisa02g2487 282 FunFam dr1-associated corepressor homolog 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2487 Bisa-ChrBisa02 62458930 62469114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2487 1 272 CCAAT-HAP5 Transcription Factor Family AT3G12480 49.141 4.55e-77 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa02g2487 CBFD_NFYB_HMF 9.5e-20 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g2487 02 62458930 62469114 Bisa02g2487 02 62458930 62469114 ECH