Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2486 ATGGCAGCTCATGATCTCTCTGAGGCCTCCAGCATCTCCGAAGGAAATTCGCGAAAAGAAGGTACCCAGACGAAGAAGATGACGATGACGATGACGATGAAAAAAGTTGGCAGTGATCATCATCAAAAGGGTCTCGATTTCATGAAGCTTTCTAGCGATGGTGACCATGACGTCAATGATGACATGGTTGGTGTAGGGTCAAATTCAAAGATAACAGTACTAGATTTTTTCAATTCTAAGGTAGCAAACAACAACACTAATGAGGGCACAGACGAGAACAAGACATCATCGGATCAATCAACGAGAACCTTCTCCTGCAACTTTTGCAAGAGAGAGTTCTCGTCCTCACAGGCTCTCGGAGGGCATCAAAACGCGCACAAACAAGAGCGTGCACTGGCGAAACGACGTCAAGGAATAGATGTCGTTGGTCACCCTAATCATCATCATCATCCCCATCACTTTCCTTATTACCCTTCTTATCATCATCCAAGCCCTCTCTATGGGTCCTTCAGTAGGGCACTTGGGGTGAGGATGGAGTCACTGATTCATAAACCACCTTCTTACCCTAATTGGACCTCCTCGACCTCGCCGGTAGGACTAGCATCCTACAGGTTTAGCCATGGCGGTCCGTCTGGGTGGTCTGGGGCTCAAGCCATGATGACCCAACCTTTAGCCACTGATAGGCTGAGAATGGAGGGTTTTGGAAGCCCTGGCCACCATGGCGATTCTTCTTCAATTGTTGCTATTAACAAGGCAATAGCCTCTAATACTCCTGTTACTACTTTTGTTGAACATTGTCAAGCTGTGAAGCCAGAAGAAGAAGCCTCAAAAGCTGATGATGGTGATGATATTCCTGAATCTTCTGGGCTCGATTTGTCACTTAAGCTTTGA 891 0.4658 MAAHDLSEASSISEGNSRKEGTQTKKMTMTMTMKKVGSDHHQKGLDFMKLSSDGDHDVNDDMVGVGSNSKITVLDFFNSKVANNNTNEGTDENKTSSDQSTRTFSCNFCKREFSSSQALGGHQNAHKQERALAKRRQGIDVVGHPNHHHHPHHFPYYPSYHHPSPLYGSFSRALGVRMESLIHKPPSYPNWTSSTSPVGLASYRFSHGGPSGWSGAQAMMTQPLATDRLRMEGFGSPGHHGDSSSIVAINKAIASNTPVTTFVEHCQAVKPEEEASKADDGDDIPESSGLDLSLKL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2486 296 Gene3D Classic Zinc Finger 83 146 - -
Bisa02g2486 296 MobiDBLite consensus disorder prediction 270 296 - -
Bisa02g2486 296 MobiDBLite consensus disorder prediction 9 25 - -
Bisa02g2486 296 SUPERFAMILY beta-beta-alpha zinc fingers 101 131 IPR036236 -
Bisa02g2486 296 MobiDBLite consensus disorder prediction 270 284 - -
Bisa02g2486 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Bisa02g2486 296 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 4 296 IPR044246 GO:0009788
Bisa02g2486 296 MobiDBLite consensus disorder prediction 1 25 - -
Bisa02g2486 296 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2486 Bisa-ChrBisa02 62394813 62395703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2486 45 188 C2H2 Transcription Factor Family AT5G10970 35.220 1.42e-19 84.7