Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2481 ATGTCGCGATGGTCATTTTTTCTCGCATTTTCCCTCCACTTTCTCTTCTCGGTTGTTGCAGCCCAGAACAGAAGCACCAGCACAGAGCCACTTGAATATCGCTACGCTTGTTTGGACCAAAGTGGGTCGTCACCATCTTCAAAATACAACTCCAACCTCAATAATTTAATCTCTTTGCTCTCTTCTGATGCTTCCACCGGCAATGGCTTTGGCAATAGAACATTAGGTGGTGATGATGGTGATGAGAGCAGTTTGGTGTATGGACTTTATCTCTGTAGAGGTGATGTTAACAGAAGCTTGTGCCATTCATGTGTTCGAGATTCTGGAAACTTGGTCCGACAACACTGCCCTAATAATGCTACAGCCATTCTATGGTACCCTTTTTGCCTTATCAGGTACTCCAACCAAGATTTCTTCGGAAACCTCACAATGAGGCCGAGGATTCCAATGTTGGATTCATCACAGAACTTGACGAGCGCAGGAGAATTCGACAGTGACGCTAGGATTCTGATGAACGGTCTGATAGAGACAGGGTCAAAGACAGAGCTAATGTTTGGGACACACATGTTCAACATTAATGGCACACAGAAGAGGTATGGTTGGGTGCAGTGCAGCAGAGACATCAGCAGTGAGGAGTGCAGGACATGTCTGAGTGATATGCTTGAGGATGTTGAGAACTGCTGTGAGAGGAAGAGGGTTTGGAGAATCTTCTCTCCTAGTTGCATTGTCATGTATGAGACTCAGCCTTTCTTTGTCAATGACACTGCCCTCATTTCACCATCAGGGCAGCCAGGCAATGAAAATAGTAACAGAAGGGCAATGCTTATAGTTATCATTGTTGTAAGTGTAGTGGCAGTAATAGCTCTACTGGTTTGCTGCACAGTTTACTTCAGGTGCTTGAGAAGTAAAAAAGATAAAAAGGCTATGGAGGAAGATGGGATAAAACCAGTATTTTCTGAAGATGAAATTGGTGGGGAGGATTCTATGAATGCTGATCTTCCTATGATACCTTTGAGTACTATTCTGAAAACAACATGCAATTTTTCTGATGGATATAAATTGGGCCAAGGTGGATTTGGCCCTGTTTATAAGGGTACATTACCTGATGGAAGGCAAATAGCAGTTAAAAGGCTGTCAAAAACTTCAGGTCAAGGCCTAAAGGAGTTGAAGAATGAAGTGATCTTAATTGCAAAATTGCAGCATCGTAACCTTGTGAGATTGCTGGCTTGTTGCATTGAGCAAAACGAAAAGCTGCTCGTGTATGAGTACATGCCTAATTCTAGCCTTGATTTTCACCTTTTTGATGTAGAGAAGCGTTCAAAGCTGGAATGGAAACTAAGATTAAGCATCATTAGTGGAATTGCAAAAGGGCTTCTGTATCTTCATGAGGACTCGAGACTTAGAGTCATCCATAGAGACCTAAAAGCTAGCAATATCTTGTTGGATCATGCAATGAATCCGAAAATCTCAGACTTCGGATTGGCAAGAACTTTTGGAGGAGACCAAAGGCAGGAAAATACAGCAAGAGTAGTTGGAACATATGGATACATGGCACCCGAGTATGCTATGGAGGGCTTATTTTCTGTGAAATCTGATGTTTTTAGCTTTGGCGTTCTTCTCCTAGAGATCATTAGTGGAAACAAGAATAGTGGATTCTATCTTTCTAAACATGGTCAAAGCCTTCTTGTCTATGCATGGAAGCTGTGGTGTGAAGGTAAAGCCCTGGAATTGTTGGATCCATTACTGGAAATGTCATATGATCCAAATGAAGTTCTCAAGTGTATCCACATTGGCCTTCTGTGTGTTCAAGAAGATGCAGCATATAGACCCACGATGTCAAATGTTGTGCTTATGCTTGCAAGTGACTCAATGAACCTTCCAAAACCCACACAGCCTGCATTTTCTGTTGGAAGAGTTTTCATGGAAAAGGAGTCTTCATCCAACATTTCTGTTCATGATACTGTCAATGGAATAACGGTTACTGAAGTTGGACCTAGATGA 2001 0.4223 MSRWSFFLAFSLHFLFSVVAAQNRSTSTEPLEYRYACLDQSGSSPSSKYNSNLNNLISLLSSDASTGNGFGNRTLGGDDGDESSLVYGLYLCRGDVNRSLCHSCVRDSGNLVRQHCPNNATAILWYPFCLIRYSNQDFFGNLTMRPRIPMLDSSQNLTSAGEFDSDARILMNGLIETGSKTELMFGTHMFNINGTQKRYGWVQCSRDISSEECRTCLSDMLEDVENCCERKRVWRIFSPSCIVMYETQPFFVNDTALISPSGQPGNENSNRRAMLIVIIVVSVVAVIALLVCCTVYFRCLRSKKDKKAMEEDGIKPVFSEDEIGGEDSMNADLPMIPLSTILKTTCNFSDGYKLGQGGFGPVYKGTLPDGRQIAVKRLSKTSGQGLKELKNEVILIAKLQHRNLVRLLACCIEQNEKLLVYEYMPNSSLDFHLFDVEKRSKLEWKLRLSIISGIAKGLLYLHEDSRLRVIHRDLKASNILLDHAMNPKISDFGLARTFGGDQRQENTARVVGTYGYMAPEYAMEGLFSVKSDVFSFGVLLLEIISGNKNSGFYLSKHGQSLLVYAWKLWCEGKALELLDPLLEMSYDPNEVLKCIHIGLLCVQEDAAYRPTMSNVVLMLASDSMNLPKPTQPAFSVGRVFMEKESSSNISVHDTVNGITVTEVGPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2481 666 SMART serkin_6 348 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2481 666 Pfam Salt stress response/antifungal 155 247 IPR002902 -
Bisa02g2481 666 Pfam Salt stress response/antifungal 42 136 IPR002902 -
Bisa02g2481 666 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Bisa02g2481 666 FunFam Cysteine-rich receptor-like protein kinase 28 33 137 - -
Bisa02g2481 666 Pfam Protein tyrosine and serine/threonine kinase 352 617 IPR001245 GO:0004672|GO:0006468
Bisa02g2481 666 FunFam Cysteine-rich receptor-like protein kinase 10 148 250 - -
Bisa02g2481 666 ProSiteProfiles Protein kinase domain profile. 348 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g2481 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 646 - -
Bisa02g2481 666 Pfam Domain of unknown function (DUF3403) 621 666 IPR021820 GO:0004674
Bisa02g2481 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Bisa02g2481 666 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Bisa02g2481 666 ProSiteProfiles Gnk2-homologous domain profile. 145 250 IPR002902 -
Bisa02g2481 666 Gene3D - 31 138 IPR038408 -
Bisa02g2481 666 Gene3D - 149 250 IPR038408 -
Bisa02g2481 666 CDD STKc_IRAK 354 619 - -
Bisa02g2481 666 SUPERFAMILY Protein kinase-like (PK-like) 332 642 IPR011009 -
Bisa02g2481 666 FunFam Liguleless narrow1 424 627 - -
Bisa02g2481 666 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 317 423 - -
Bisa02g2481 666 Gene3D Phosphorylase Kinase; domain 1 316 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2481 Bisa-ChrBisa02 62292270 62299494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2481 14 666 Receptor kinase-like Gene Family AT4G05200 40.265 1.57e-172 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g2481 PK_Tyr_Ser-Thr 1.8e-47 CL0016