Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g2480 ATGGGAGCATCAATACTCATTTCCTTTTTGAGATCTCTGATAATCTTCATAGGTCTTACTAAAACAAGTACTGCTCAAGCACCAAACTACGTCGGAGATGACTGCCGTAACCGTAGCTCAGCTGAACGACCTCTATCTGCTTCATACCAAGCCAACCTCAAAGACATCCTCGCGTGGCTAGCCAACGATGCTGCCACCAGTAAAGGCTACAACCACACCGCAATAGGGAACAGCAGCGACGCGGTCTATGGCCTGTACGACTGCAGGGGAGACGACGCCGGATACTTTTGCCAGTTCTGCGTCTCCACCGCCACCAGAGAAGTTCGCCAACGTTGTCCCAATCGAGCCTCCGCTGTAATATGGTATGATTTTTGCATCCTCCGATATTCCAATAAGAACTTCTTCGGCAATGTGACAACAAGTCCCTCATGGCACGCATTTCGACCGAAGAACGTGTCAGACTCGACAGAGCCGGCAAAAGCATTAAGCTACATGAAGGGTCTAATACAGCTAGCCACAAAGGAGACGAAGCAGTTGTTTGCAATGGGAGGCTTCAACATGGGTGGTGGGAAGCAAAGGTATGGGATGGTGCAGTGTAGTAGAGACCTCACCGATAAGGGGTGTGAACAGTGCTTGGAGGCTATGGTGGACAAGGTTCCTCAATGCTGTGAGGAGAAGCAGGGATGGCAGGTCTTGGCTCCTAGCTGTTTAATCAAGTATGATGATTATATGTTTTACCAGATTAAGAATCAAACGACGTCAAGTCCTAGTCTTAATACAGGGAGTAACAGTGCTAACAAGTCGAAAGCCTTGATTATAAGCATAAGTGTATTAGTGGCAGTAGCTATACTAAGTTGCAGTGTCTACTACTTTTGGAGAAGGAAGTTACATAAAGATGAAATGCCATCTGACGAGGCCGCTCTTATGATTCTTGGCCCTTCCCAAATAAATATTCCATTGAACACAGATCTCTCCACAATCCCTTTGATTTCAATTCAACAGAGTACTCAAAACTTCTCAAAAGCATCCAAATTGGGAGAAGGTGGATTTGGTCCTGTCTACAAGTATGCTATAGAAGGATTCTTTTCAGTGAAATCTGATGTTTTCAGCTTTGGAGTTCTTCTGTTAGAAATCATTTGTGGGCAAAGGAATAGTGGTTTCTACATCTCAGAACATGGTCAAAGTCTTACCATTTATACTTGGGGATTGTGGAATGAAGGAAAATGTTTGGAATTGATGGATCCAATACTGGAGGAGTCTTACACAGAAAATGAAGTTTTGAAGTGCATACACATTGGTTTATTGTGTGTTCAAGCAGATGCAGCAGATAGGCCAACCATGTCCACTGTTATGGTCATGCTTGCAAGTGACACAATGTCCCTTCCCAAACCTAATTACCCTGCATTTTCAGTTGGAAGAATGGTCATGGGTGAATCATCCACATCAAAAAATTCCAAGGGTCCTTCTATCAATGAGGTAACAGTATCTAATGTTATGCCTCGTTAA 1506 0.4409 MGASILISFLRSLIIFIGLTKTSTAQAPNYVGDDCRNRSSAERPLSASYQANLKDILAWLANDAATSKGYNHTAIGNSSDAVYGLYDCRGDDAGYFCQFCVSTATREVRQRCPNRASAVIWYDFCILRYSNKNFFGNVTTSPSWHAFRPKNVSDSTEPAKALSYMKGLIQLATKETKQLFAMGGFNMGGGKQRYGMVQCSRDLTDKGCEQCLEAMVDKVPQCCEEKQGWQVLAPSCLIKYDDYMFYQIKNQTTSSPSLNTGSNSANKSKALIISISVLVAVAILSCSVYYFWRRKLHKDEMPSDEAALMILGPSQINIPLNTDLSTIPLISIQQSTQNFSKASKLGEGGFGPVYKYAIEGFFSVKSDVFSFGVLLLEIICGQRNSGFYISEHGQSLTIYTWGLWNEGKCLELMDPILEESYTENEVLKCIHIGLLCVQADAADRPTMSTVMVMLASDTMSLPKPNYPAFSVGRMVMGESSTSKNSKGPSINEVTVSNVMPR 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g2480 501 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Bisa02g2480 501 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 42 355 - -
Bisa02g2480 501 ProSiteProfiles Gnk2-homologous domain profile. 140 245 IPR002902 -
Bisa02g2480 501 Gene3D Transferase(Phosphotransferase) domain 1 345 462 - -
Bisa02g2480 501 Pfam Domain of unknown function (DUF3403) 456 501 IPR021820 GO:0004674
Bisa02g2480 501 Pfam Salt stress response/antifungal 177 243 IPR002902 -
Bisa02g2480 501 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Bisa02g2480 501 SUPERFAMILY Protein kinase-like (PK-like) 360 472 IPR011009 -
Bisa02g2480 501 Gene3D - 29 134 IPR038408 -
Bisa02g2480 501 Gene3D - 143 245 IPR038408 -
Bisa02g2480 501 FunFam Cysteine-rich receptor-like protein kinase 10 143 245 - -
Bisa02g2480 501 FunFam Cysteine-rich receptor-like protein kinase 28 31 133 - -
Bisa02g2480 501 MobiDBLite consensus disorder prediction 479 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g2480 Bisa-ChrBisa02 62173785 62183194 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g2480 296 501 Receptor kinase-like Gene Family AT4G05200 36.486 1.73e-32 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa02g2480 Stress-antifung 2e-16 No_clan